RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MYH6P13533 1939 aa10.46□□□□□ -0.74
HDAC3-212ENST00000492407 TRIP12Q14669 1992 aaPredicted RBP10.46□□□□□ -0.74
HDAC3-212ENST00000492407 ENPP3O14638 875 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 CTSHP09668 335 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 BMPR1AP36894 532 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 PLA2G5P39877 138 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 GRIK4Q16099 956 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 TSGA10IPQ3SY00 556 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 TMEM31Q5JXX7 168 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 MARCH8Q5T0T0 291 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 CREB3L3Q68CJ9 461 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 MCTP2Q6DN12 878 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 TSHZ1Q6ZSZ6 1077 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 TRIM50Q86XT4 487 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 FAM178BQ8IXR5 827 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 BANK1Q8NDB2 785 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-212ENST00000492407 PIBF1Q8WXW3 757 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 GLG1Q92896 1179 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 PABPC5Q96DU9 382 aaKnown RBP10.45□□□□□ -0.74
HDAC3-212ENST00000492407 MXRA8Q9BRK3 442 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 C11orf84Q9BUA3 381 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-212ENST00000492407 MYL10Q9BUA6 226 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 ZMYND15Q9H091 742 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 NSUN3Q9H649 340 aaKnown RBP10.45□□□□□ -0.74
HDAC3-212ENST00000492407 AZI2Q9H6S1 392 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 JPH1Q9HDC5 661 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-212ENST00000492407 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-212ENST00000492407 PRKAG3Q9UGI9 489 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 TUBE1Q9UJT0 475 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 PCDHA2Q9Y5H9 948 aa10.45□□□□□ -0.74
HDAC3-212ENST00000492407 KDM3AQ9Y4C1 1321 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 GRXCR2A6NFK2 248 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 ATG7O95352 703 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 ALADP13716 330 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 KCNA5P22460 613 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 EXOSC10Q01780 885 aaKnown RBP10.44□□□□□ -0.74
HDAC3-212ENST00000492407 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 LPIN1Q14693 890 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 FBXO47Q5MNV8 452 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 PTCRAQ6ISU1 281 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-212ENST00000492407 NIPA1Q7RTP0 329 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 GJD3Q8N144 294 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 P2RX5Q93086 422 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 ZNF689Q96CS4 500 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-212ENST00000492407 FAM122AQ96E09 287 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 SDF4Q9BRK5 362 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 LRFN3Q9BTN0 628 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 EPHX3Q9H6B9 360 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 RC3H2Q9HBD1 1191 aaKnown RBP10.44□□□□□ -0.74
HDAC3-212ENST00000492407 RIC8AQ9NPQ8 531 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 KCNH7Q9NS40 1196 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 SLC9A2Q9UBY0 812 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 HCN4Q9Y3Q4 1203 aa10.44□□□□□ -0.74
HDAC3-212ENST00000492407 PTPRSQ13332 1948 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 ADGRA3Q8IWK6 1321 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 M0QZ92 97 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 MEIS1O00470 390 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 DGKIO75912 1065 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 UPP2O95045 317 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 LINC00271P0C7V0 271 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 STAG3L1P0CL83 205 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 GHRP10912 638 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 INSRRP14616 1297 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 STAT5BP51692 787 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 MRPS6P82932 125 aaKnown RBP10.43□□□□□ -0.74
HDAC3-212ENST00000492407 SP4Q02446 784 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 KRT32Q14532 448 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 CEP55Q53EZ4 464 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 BMP2KLQ5H9B9 411 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 ODR4Q5SWX8 454 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 RUFY4Q6ZNE9 571 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 DHX32Q7L7V1 743 aaKnown RBP10.43□□□□□ -0.74
HDAC3-212ENST00000492407 HEATR3Q7Z4Q2 680 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 CRIPAKQ8N1N5 446 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 NEK1Q96PY6 1258 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 MYH7BA7E2Y1 1941 aa10.43□□□□□ -0.74
HDAC3-212ENST00000492407 IGKV6D-21A0A0A0MT36 114 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 SMIM35A0A1B0GVV1 85 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 CTNNB1P35222 781 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 FUT2Q10981 343 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 UBE2SQ16763 222 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 CTC1Q2NKJ3 1217 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 TCEAL5Q5H9L2 206 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 APOA5Q6Q788 366 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 NPAS4Q8IUM7 802 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 CMTR2Q8IYT2 770 aaKnown RBP10.42□□□□□ -0.74
HDAC3-212ENST00000492407 CMTR1Q8N1G2 835 aaKnown RBP10.42□□□□□ -0.74
HDAC3-212ENST00000492407 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 DNAJB3Q8WWF6 145 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 PPP2R3CQ969Q6 453 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 PCYT2Q99447 389 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 OSBPL7Q9BZF2 842 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 UPF3BQ9BZI7 483 aaKnown RBP10.42□□□□□ -0.74
HDAC3-212ENST00000492407 ANO2Q9NQ90 1003 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 BARHL2Q9NY43 387 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 TELO2Q9Y4R8 837 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 TRPV2Q9Y5S1 764 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 CDY2AQ9Y6F7 541 aa10.42□□□□□ -0.74
HDAC3-212ENST00000492407 SIP14410 1827 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms