RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 EXOC3O60645 756 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 SERPING1P05155 500 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TUBBP07437 444 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 SCFD1Q8WVM8 642 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CCDC127Q96BQ5 260 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 STRCP1A6NGW2 1772 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 GOLGA8IPA6NC78 632 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 GOLGA8JA6NMD2 632 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 GYS1P13807 737 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CRKP46108 304 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 COG2Q14746 738 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MEA1Q16626 185 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TTC31Q49AM3 519 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CTNNBL1Q8WYA6 563 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ZIM3Q96PE6 472 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DNAJC17Q9NVM6 304 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 NUP188Q5SRE5 1749 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PKD1L3Q7Z443 1732 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MYH14Q7Z406 1995 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PPP1R12BO60237 982 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 BUB1BO60566 1050 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CYP11B2P19099 503 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 VPS41P49754 854 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TUBB4BP68371 445 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ADCY1Q08828 1119 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 KLHDC7AQ5VTJ3 777 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 HAUS3Q68CZ6 603 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MTMR9Q96QG7 549 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TMEM51Q9NW97 253 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ATP6V0A2Q9Y487 856 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 LAMB4A4D0S4 1761 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 NID2Q14112 1375 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ADAMTSL3P82987 1691 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ABCB5Q2M3G0 1257 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DAGLBQ8NCG7 672 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CSRNP1Q96S65 589 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DHX36Q9H2U1 1008 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MAGEF1Q9HAY2 307 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 RIC8AQ9NPQ8 531 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 RABGAP1Q9Y3P9 1069 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 GLI3P10071 1580 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ADAMTS7Q9UKP4 1686 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MYH15Q9Y2K3 1946 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 BBOX1O75936 387 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 RPGRIP1Q96KN7 1286 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 SELENOSQ9BQE4 189 aa16.63■□□□□ 0.25
TNFRSF1B-203ENST00000492361 RAD51CO43502 376 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TLR2O60603 784 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 RAD17O75943 681 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CTNNA1P35221 906 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PPP1R2P41236 205 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 SLCO1A2P46721 670 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TNNC1P63316 161 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ODR4Q5SWX8 454 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 LRRC55Q6ZSA7 311 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 BANK1Q8NDB2 785 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TTYH3Q9C0H2 523 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PTPN22Q9Y2R2 807 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MMP10P09238 476 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ECE1P42892 770 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 MNAT1P51948 309 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PAK2Q13177 524 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 WDR93Q6P2C0 686 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 AMNQ9BXJ7 453 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 RIOX1Q9H6W3 641 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ATP8A1Q9Y2Q0 1164 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ANO9A1A5B4 782 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 ITGA4P13612 1032 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 SSTR3P32745 418 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 HS2ST1Q7LGA3 356 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FAM84AQ96KN4 292 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TMOD4Q9NZQ9 345 aa16.62■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CNTNAP4Q9C0A0 1308 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 GAS7O60861 476 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 AFPP02771 609 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CHRNA5P30532 468 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 SHMT1P34896 483 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 IRAK1P51617 712 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 EPHB4P54760 987 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PPFIA1Q13136 1202 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 OTUD6BQ8N6M0 293 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 RUSC1Q9BVN2 902 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 CEP72Q9P209 647 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 PLAAQ9Y263 795 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 H2AFZP0C0S5 128 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 TNFAIP3P21580 790 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DDR1Q08345 913 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 NBPF9Q3BBW0 867 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 KRT71Q3SY84 523 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 H2AFVQ71UI9 128 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 FAM178BQ8IXR5 827 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 IPO4Q8TEX9 1081 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 BAP1Q92560 729 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 DAPK3O43293 454 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 AKAP3O75969 853 aa16.61■□□□□ 0.25
TNFRSF1B-203ENST00000492361 NR3C1P04150 777 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms