RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TMTC2Q8N394 836 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 GLG1Q92896 1179 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 GPRASP2Q96D09 838 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 MXRA8Q9BRK3 442 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 USP26Q9BXU7 913 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 AGO3Q9H9G7 860 aaKnown RBP10.2□□□□□ -0.78
HDAC3-211ENST00000491581 CDHR5Q9HBB8 845 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 AGO4Q9HCK5 861 aaKnown RBP10.2□□□□□ -0.78
HDAC3-211ENST00000491581 PLXNA4Q9HCM2 1894 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 RIC8AQ9NPQ8 531 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 STAM2O75886 525 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 INSRRP14616 1297 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 HSPA4P34932 840 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 ADCY7P51828 1080 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 ACTR2P61160 394 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 PLCB4Q15147 1175 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 TMEM266Q2M3C6 531 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 RTN4RL1Q86UN2 441 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-211ENST00000491581 SEPT1Q8WYJ6 367 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 CCDC136Q96JN2 1154 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 AIFM3Q96NN9 605 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 RAD9AQ99638 391 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 SENP7Q9BQF6 1050 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 MTA3Q9BTC8 594 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 CD320Q9NPF0 282 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 HCSTQ9UBK5 93 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 CDY2AQ9Y6F7 541 aa10.19□□□□□ -0.78
HDAC3-211ENST00000491581 IGLV3-22A0A075B6J6 115 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 KIF28PB7ZC32 967 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 GABBR2O75899 941 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 LINC00271P0C7V0 271 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 ATP4AP20648 1035 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 CD52P31358 61 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 METAP2P50579 478 aaKnown RBP eCLIP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 ERVK-21P61565 698 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 MRPS5P82675 430 aaKnown RBP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 HTRA4P83105 476 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 TRAF1Q13077 416 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 TSGA10IPQ3SY00 556 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 SYNE3Q6ZMZ3 975 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 CCDC60Q8IWA6 550 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 ATXN2LQ8WWM7 1075 aaKnown RBP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 KCNB2Q92953 911 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 ZNF668Q96K58 619 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 UHRF1Q96T88 793 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 IFIH1Q9BYX4 1025 aaKnown RBP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 JPH1Q9HDC5 661 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 BARHL2Q9NY43 387 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 VPS54Q9P1Q0 977 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 SLC9A2Q9UBY0 812 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 TUBE1Q9UJT0 475 aa10.18□□□□□ -0.78
HDAC3-211ENST00000491581 ZNF215Q9UL58 517 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-211ENST00000491581 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 DHX15O43143 795 aaKnown RBP10.17□□□□□ -0.78
HDAC3-211ENST00000491581 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-211ENST00000491581 AMHP03971 560 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 SCG2P13521 617 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 RPS6KB1P23443 525 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 GTF2F1P35269 517 aaKnown RBP eCLIP10.17□□□□□ -0.78
HDAC3-211ENST00000491581 STK3Q13188 491 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 TOB2Q14106 344 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-211ENST00000491581 NTRK3Q16288 839 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 PFKFB3Q16875 520 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-211ENST00000491581 EPC2Q52LR7 807 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 FAM26DQ5JW98 314 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 FBXO47Q5MNV8 452 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 FBXO22Q8NEZ5 403 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 CRYGNQ8WXF5 182 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 SEPT8Q92599 483 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 TOP1MTQ969P6 601 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 TGS1Q96RS0 853 aaKnown RBP10.17□□□□□ -0.78
HDAC3-211ENST00000491581 YME1L1Q96TA2 773 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 UPF3BQ9BZI7 483 aaKnown RBP10.17□□□□□ -0.78
HDAC3-211ENST00000491581 EHMT1Q9H9B1 1298 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 GJB4Q9NTQ9 266 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 RBM28Q9NW13 759 aaKnown RBP10.17□□□□□ -0.78
HDAC3-211ENST00000491581 ERAP1Q9NZ08 941 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 TRPC6Q9Y210 931 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 PCDHGC5Q9Y5F6 944 aa10.17□□□□□ -0.78
HDAC3-211ENST00000491581 EMSYQ7Z589 1322 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 NRCAMQ92823 1304 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 MYH9P35579 1960 aaKnown RBP10.16□□□□□ -0.78
HDAC3-211ENST00000491581 MBLAC1A4D2B0 266 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-211ENST00000491581 TMEM150BA6NC51 233 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 ZBTB42B2RXF5 422 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 MEIS1O00470 390 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 ENPP3O14638 875 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 MGEA5O60502 916 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 POU3F3P20264 500 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-211ENST00000491581 ZNF76P36508 570 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 SREBF1P36956 1147 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 FGD1P98174 961 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 PAN2Q504Q3 1202 aaKnown RBP10.16□□□□□ -0.78
HDAC3-211ENST00000491581 CEP55Q53EZ4 464 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 XRRA1Q6P2D8 792 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 BLOC1S2Q6QNY1 142 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 PLA2G4DQ86XP0 818 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 TMEM40Q8WWA1 233 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms