RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ADD3Q9UEY8 706 aaKnown RBP25.35■■□□□ 1.65
USF3-203ENST00000491165 GPR25O00155 361 aa25.34■■□□□ 1.65
USF3-203ENST00000491165 MEIS1O00470 390 aa25.34■■□□□ 1.65
USF3-203ENST00000491165 DHX58Q96C10 678 aa25.34■■□□□ 1.65
USF3-203ENST00000491165 SAMSN1Q9NSI8 373 aaKnown RBP25.34■■□□□ 1.65
USF3-203ENST00000491165 MSH4O15457 936 aa25.34■■□□□ 1.65
USF3-203ENST00000491165 CCND2P30279 289 aa25.34■■□□□ 1.65
USF3-203ENST00000491165 ADKP55263 362 aaKnown RBP25.34■■□□□ 1.65
USF3-203ENST00000491165 EEPD1Q7L9B9 569 aa25.34■■□□□ 1.65
USF3-203ENST00000491165 MAML3Q96JK9 1138 aa25.34■■□□□ 1.65
USF3-203ENST00000491165 IWS1Q96ST2 819 aa25.34■■□□□ 1.65
USF3-203ENST00000491165 GABRQQ9UN88 632 aa25.34■■□□□ 1.65
USF3-203ENST00000491165 BMP15O95972 392 aa25.33■■□□□ 1.65
USF3-203ENST00000491165 CLCN6P51797 869 aa25.33■■□□□ 1.65
USF3-203ENST00000491165 BMS1Q14692 1282 aaKnown RBP25.33■■□□□ 1.65
USF3-203ENST00000491165 NR1I3Q14994 352 aa25.33■■□□□ 1.65
USF3-203ENST00000491165 CALCRLQ16602 461 aa25.33■■□□□ 1.65
USF3-203ENST00000491165 FLRT1Q9NZU1 646 aa25.33■■□□□ 1.65
USF3-203ENST00000491165 A0A1B0GTH6 734 aa25.33■■□□□ 1.64
USF3-203ENST00000491165 OR52Z1P0C646 297 aa25.33■■□□□ 1.64
USF3-203ENST00000491165 SLFN14P0C7P3 912 aa25.33■■□□□ 1.64
USF3-203ENST00000491165 MAP2K5Q13163 448 aa25.33■■□□□ 1.64
USF3-203ENST00000491165 SEMA3FQ13275 785 aa25.33■■□□□ 1.64
USF3-203ENST00000491165 INPP4AQ96PE3 977 aaPredicted RBP25.33■■□□□ 1.64
USF3-203ENST00000491165 KCNH7Q9NS40 1196 aa25.33■■□□□ 1.64
USF3-203ENST00000491165 SAGE1Q9NXZ1 904 aa25.33■■□□□ 1.64
USF3-203ENST00000491165 EFCAB8A8MWE9 144 aa25.32■■□□□ 1.64
USF3-203ENST00000491165 TADA3O75528 432 aa25.32■■□□□ 1.64
USF3-203ENST00000491165 CCL14Q16627 93 aa25.32■■□□□ 1.64
USF3-203ENST00000491165 CD99L2Q8TCZ2 262 aa25.32■■□□□ 1.64
USF3-203ENST00000491165 FERMT2Q96AC1 680 aa25.32■■□□□ 1.64
USF3-203ENST00000491165 JADE2Q9NQC1 790 aa25.32■■□□□ 1.64
USF3-203ENST00000491165 ARGLU1Q9NWB6 273 aaPredicted RBP25.32■■□□□ 1.64
USF3-203ENST00000491165 CYP2B6P20813 491 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 CASQ1P31415 396 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 TXKP42681 527 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 FCGRTP55899 365 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 MAP2K1Q02750 393 aaPredicted RBP25.31■■□□□ 1.64
USF3-203ENST00000491165 ORC2Q13416 577 aaPredicted RBP25.31■■□□□ 1.64
USF3-203ENST00000491165 STXBP2Q15833 593 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 TOGARAM2Q6ZUX3 1019 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 ZNF296Q8WUU4 475 aaPredicted RBP25.31■■□□□ 1.64
USF3-203ENST00000491165 EPSTI1Q96J88 318 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 NUDT12Q9BQG2 462 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 A0A087X0B3 334 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 ATP9AO75110 1047 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 GNG11P61952 73 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 ARMCX2Q7L311 632 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 ZNF771Q7L3S4 317 aaPredicted RBP25.31■■□□□ 1.64
USF3-203ENST00000491165 MORC4Q8TE76 937 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 CARD6Q9BX69 1037 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 WBP1LQ9NX94 342 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 PKD2L1Q9P0L9 805 aa25.31■■□□□ 1.64
USF3-203ENST00000491165 TPM1P09493 284 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 MTMR1Q13613 665 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 SPATA1Q5VX52 437 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 SH3RF1Q7Z6J0 888 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 SYMPKQ92797 1274 aaKnown RBP25.3■■□□□ 1.64
USF3-203ENST00000491165 PAGE5Q96GU1 130 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 BCAS3Q9H6U6 928 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 SYNRGQ9UMZ2 1314 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 HOXC6P09630 235 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 AFMP43652 599 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 PRKCZQ05513 592 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 PDE4DQ08499 809 aa25.3■■□□□ 1.64
USF3-203ENST00000491165 FBXO16Q8IX29 292 aaPredicted RBP25.3■■□□□ 1.64
USF3-203ENST00000491165 NAP1L4Q99733 375 aaKnown RBP25.3■■□□□ 1.64
USF3-203ENST00000491165 CDC25AP30304 524 aa25.29■■□□□ 1.64
USF3-203ENST00000491165 TECP42680 631 aa25.29■■□□□ 1.64
USF3-203ENST00000491165 ARL6IP4Q66PJ3 421 aaKnown RBP25.29■■□□□ 1.64
USF3-203ENST00000491165 XRRA1Q6P2D8 792 aa25.29■■□□□ 1.64
USF3-203ENST00000491165 DIS3Q9Y2L1 958 aaKnown RBP25.29■■□□□ 1.64
USF3-203ENST00000491165 DNAH12Q6ZR08 3092 aa25.29■■□□□ 1.64
USF3-203ENST00000491165 AKR1B15C9JRZ8 316 aaPredicted RBP25.28■■□□□ 1.64
USF3-203ENST00000491165 LAD1O00515 517 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 EIF3JO75822 258 aaKnown RBP25.28■■□□□ 1.64
USF3-203ENST00000491165 SNAI1O95863 264 aaPredicted RBP25.28■■□□□ 1.64
USF3-203ENST00000491165 PRPHP41219 470 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 ITGB3BPQ13352 177 aaPredicted RBP25.28■■□□□ 1.64
USF3-203ENST00000491165 TMEM63BQ5T3F8 832 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 MAMDC4Q6UXC1 1216 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 SEPT14Q6ZU15 432 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 GSDMAQ96QA5 445 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 PANX2Q96RD6 677 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 WDR24Q96S15 920 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 PP2D1A8MPX8 630 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 FLT3LGP49771 235 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 SETQ01105 290 aaPredicted RBP25.28■■□□□ 1.64
USF3-203ENST00000491165 SP2Q02086 613 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 CUL4BQ13620 913 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 TERF2Q15554 542 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 ZNF467Q7Z7K2 595 aaPredicted RBP25.28■■□□□ 1.64
USF3-203ENST00000491165 SOCS4Q8WXH5 440 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 KATNBL1Q9H079 304 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 FHOD1Q9Y613 1164 aa25.28■■□□□ 1.64
USF3-203ENST00000491165 POTEMA6NI47 508 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 SPIRE1Q08AE8 756 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 KLHL10Q6JEL2 608 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 NIPA1Q7RTP0 329 aa25.27■■□□□ 1.64
USF3-203ENST00000491165 APTXQ7Z2E3 356 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms