RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PHF20L1A8MW92 1017 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 NOL4O94818 638 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 MTMR3Q13615 1198 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 RPS6KA1Q15418 735 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 GALNT17Q6IS24 598 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 UNC13DQ70J99 1090 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 MMTAG2Q9BU76 263 aaKnown RBP21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 POLLQ9UGP5 575 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 A0A087X0T9 212 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 A0A1B0GUA9 196 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 TSPY2A6NKD2 308 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 DCDC2CA8MYV0 355 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 FAM228BP0C875 321 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 HOXA10P31260 410 aaPredicted RBP21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 SV2BQ7L1I2 683 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 HEATR3Q7Z4Q2 680 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 DEFB132Q7Z7B7 95 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 ANKS1AQ92625 1134 aa21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 RBM17Q96I25 401 aaKnown RBP21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.17■□□□□ 0.98
SNAPC3-206ENST00000490969 BHMG1C9JSJ3 638 aaPredicted RBP21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 DRD4P21917 467 aa21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 PAX7P23759 505 aa21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 TECP42680 631 aa21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 MAGOHP61326 146 aaKnown RBP21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 NBPF9Q3BBW0 867 aa21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 MAGOHBQ96A72 148 aaKnown RBP21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 CALML4Q96GE6 196 aa21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 MYMKA6NI61 221 aa21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 UFL1O94874 794 aa21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 FLT3P36888 993 aa21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 MECOMQ03112 1051 aa21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 TMED8Q6PL24 325 aaPredicted RBP21.16■□□□□ 0.98
SNAPC3-206ENST00000490969 PVALEFA0A1B0GWK0 134 aa21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 CCNT1O60563 726 aaKnown RBP21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 ECM2O94769 699 aaPredicted RBP21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 POLR2FP61218 127 aaKnown RBP21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 ELF3P78545 371 aaPredicted RBP21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 LETM2Q2VYF4 491 aa21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 NSUN4Q96CB9 384 aaKnown RBP21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 STXBP3O00186 592 aa21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 SART1O43290 800 aaKnown RBP21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 CEP104O60308 925 aa21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 KIF4AO95239 1232 aa21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 DYMQ7RTS9 669 aa21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 PROCA1Q8NCQ7 364 aaPredicted RBP21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 ACTRT1Q8TDG2 376 aa21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 PBKQ96KB5 322 aa21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 LSM14BQ9BX40 385 aaKnown RBP21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 ADAMTS1Q9UHI8 967 aa21.15■□□□□ 0.98
SNAPC3-206ENST00000490969 ATP6V1G2O95670 118 aa21.14■□□□□ 0.98
SNAPC3-206ENST00000490969 SATB1Q01826 763 aa21.14■□□□□ 0.98
SNAPC3-206ENST00000490969 AP1M1Q9BXS5 423 aa21.14■□□□□ 0.98
SNAPC3-206ENST00000490969 BLOC1S4Q9NUP1 217 aa21.14■□□□□ 0.98
SNAPC3-206ENST00000490969 BARHL2Q9NY43 387 aa21.14■□□□□ 0.98
SNAPC3-206ENST00000490969 SWAP70Q9UH65 585 aa21.14■□□□□ 0.98
SNAPC3-206ENST00000490969 MYH7BA7E2Y1 1941 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 F8W031 263 aaPredicted RBP21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 PPIP5K2O43314 1243 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 CYP2D6P10635 497 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 USP11P51784 963 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 ARID5AQ03989 594 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 RAPGEF1Q13905 1077 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 SLC35G1Q2M3R5 365 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 KRT71Q3SY84 523 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 PNMA1Q8ND90 353 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 FBXO41Q8TF61 875 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 CALR3Q96L12 384 aaKnown RBP21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 TSG101Q99816 390 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 NOD2Q9HC29 1040 aa21.14■□□□□ 0.97
SNAPC3-206ENST00000490969 MYH4Q9Y623 1939 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 FRMD3A2A2Y4 597 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 NEBLO76041 1014 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 GBP2P32456 591 aaPredicted RBP21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 PPP2R5AQ15172 486 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 TMC3Q7Z5M5 1100 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 CHMP6Q96FZ7 201 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 PSMD1Q99460 953 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 DDX47Q9H0S4 455 aaKnown RBP21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 DCP1AQ9NPI6 582 aaPredicted RBP21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 NRXN2Q9P2S2 1712 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 RTN2O75298 545 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 KLHL30Q0D2K2 578 aa21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 ENOX2Q16206 610 aaKnown RBP21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 CNOT10Q9H9A5 744 aaKnown RBP21.13■□□□□ 0.97
SNAPC3-206ENST00000490969 CCT8L1PA6NM43 557 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 PGRMC1O00264 195 aaKnown RBP21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 DAPK3O43293 454 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 PPP1R12BO60237 982 aaPredicted RBP21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 RPSAP08865 295 aaKnown RBP21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 GRB10Q13322 594 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 GRM4Q14833 912 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 SLC15A2Q16348 729 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 HIBCHQ6NVY1 386 aaPredicted RBP21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 CRAMP1Q96RY5 1269 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 MAD2L2Q9UI95 211 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 COL4A3BPQ9Y5P4 624 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 BTNL10A8MVZ5 291 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 CYTH3O43739 400 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 BBOX1O75936 387 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms