RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 CCDC136Q96JN2 1154 aa23.95■■□□□ 1.42
SYNE4-205ENST00000490730 FAM217BQ9NTX9 383 aaPredicted RBP23.95■■□□□ 1.42
SYNE4-205ENST00000490730 COG5Q9UP83 839 aa23.95■■□□□ 1.42
SYNE4-205ENST00000490730 TRPC6Q9Y210 931 aa23.95■■□□□ 1.42
SYNE4-205ENST00000490730 MUC3AQ02505 3323 aa23.95■■□□□ 1.42
SYNE4-205ENST00000490730 BDP1A6H8Y1 2624 aa23.95■■□□□ 1.42
SYNE4-205ENST00000490730 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.94■■□□□ 1.42
SYNE4-205ENST00000490730 ARP10275 920 aa23.94■■□□□ 1.42
SYNE4-205ENST00000490730 HTRA4P83105 476 aaPredicted RBP23.94■■□□□ 1.42
SYNE4-205ENST00000490730 CEP55Q53EZ4 464 aa23.94■■□□□ 1.42
SYNE4-205ENST00000490730 Q6ZUG5 572 aa23.94■■□□□ 1.42
SYNE4-205ENST00000490730 DNAJB3Q8WWF6 145 aa23.94■■□□□ 1.42
SYNE4-205ENST00000490730 HLA-CQ95604 372 aa23.94■■□□□ 1.42
SYNE4-205ENST00000490730 TOP1MTQ969P6 601 aa23.94■■□□□ 1.42
SYNE4-205ENST00000490730 ZBTB10Q96DT7 871 aa23.94■■□□□ 1.42
SYNE4-205ENST00000490730 NECAB3Q96P71 396 aaPredicted RBP23.94■■□□□ 1.42
SYNE4-205ENST00000490730 FAM49AQ9H0Q0 323 aaPredicted RBP23.94■■□□□ 1.42
SYNE4-205ENST00000490730 GLT8D2Q9H1C3 349 aa23.94■■□□□ 1.42
SYNE4-205ENST00000490730 ADD1P35611 737 aaKnown RBP23.93■■□□□ 1.42
SYNE4-205ENST00000490730 ACTR2P61160 394 aa23.93■■□□□ 1.42
SYNE4-205ENST00000490730 AP3B2Q13367 1082 aa23.93■■□□□ 1.42
SYNE4-205ENST00000490730 JAKMIP3Q5VZ66 844 aa23.93■■□□□ 1.42
SYNE4-205ENST00000490730 BRF1Q92994 677 aa23.93■■□□□ 1.42
SYNE4-205ENST00000490730 PCYT2Q99447 389 aa23.93■■□□□ 1.42
SYNE4-205ENST00000490730 LMCD1Q9NZU5 365 aa23.93■■□□□ 1.42
SYNE4-205ENST00000490730 NFASCO94856 1347 aa23.92■■□□□ 1.42
SYNE4-205ENST00000490730 BMP1P13497 986 aa23.92■■□□□ 1.42
SYNE4-205ENST00000490730 INSRRP14616 1297 aa23.92■■□□□ 1.42
SYNE4-205ENST00000490730 RCAN1P53805 252 aa23.92■■□□□ 1.42
SYNE4-205ENST00000490730 ITGB3BPQ13352 177 aaPredicted RBP23.92■■□□□ 1.42
SYNE4-205ENST00000490730 MARCH8Q5T0T0 291 aa23.92■■□□□ 1.42
SYNE4-205ENST00000490730 BLOC1S2Q6QNY1 142 aa23.92■■□□□ 1.42
SYNE4-205ENST00000490730 TEX2Q8IWB9 1127 aa23.92■■□□□ 1.42
SYNE4-205ENST00000490730 SP7Q8TDD2 431 aaPredicted RBP23.92■■□□□ 1.42
SYNE4-205ENST00000490730 AGO4Q9HCK5 861 aaKnown RBP23.92■■□□□ 1.42
SYNE4-205ENST00000490730 CCDC196A0A1B0GTZ2 297 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 MBLAC1A4D2B0 266 aaPredicted RBP23.91■■□□□ 1.42
SYNE4-205ENST00000490730 RRN3P2A6NIE6 340 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 DDX39AO00148 427 aaKnown RBP23.91■■□□□ 1.42
SYNE4-205ENST00000490730 SCG2P13521 617 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 SREBF1P36956 1147 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 MGAT3Q09327 533 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 LPIN1Q14693 890 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 PFKFB3Q16875 520 aaPredicted RBP23.91■■□□□ 1.42
SYNE4-205ENST00000490730 RPAINQ86UA6 219 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 SNX14Q9Y5W7 946 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 CDY2AQ9Y6F7 541 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 NLRC5Q86WI3 1866 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 NCOR1O75376 2440 aa23.91■■□□□ 1.42
SYNE4-205ENST00000490730 STAT5BP51692 787 aa23.9■■□□□ 1.42
SYNE4-205ENST00000490730 MRPS6P82932 125 aaKnown RBP23.9■■□□□ 1.42
SYNE4-205ENST00000490730 EPC2Q52LR7 807 aa23.9■■□□□ 1.42
SYNE4-205ENST00000490730 TRAPPC12Q8WVT3 735 aa23.9■■□□□ 1.42
SYNE4-205ENST00000490730 TNPO1Q92973 898 aaKnown RBP23.9■■□□□ 1.42
SYNE4-205ENST00000490730 UIMC1Q96RL1 719 aa23.9■■□□□ 1.42
SYNE4-205ENST00000490730 MEIS1O00470 390 aa23.89■■□□□ 1.41
SYNE4-205ENST00000490730 HSPA4P34932 840 aa23.89■■□□□ 1.41
SYNE4-205ENST00000490730 CLK2P49760 499 aaKnown RBP23.89■■□□□ 1.41
SYNE4-205ENST00000490730 TMEM62Q0P6H9 643 aa23.89■■□□□ 1.41
SYNE4-205ENST00000490730 PLCB4Q15147 1175 aa23.89■■□□□ 1.41
SYNE4-205ENST00000490730 KCNB2Q92953 911 aa23.89■■□□□ 1.41
SYNE4-205ENST00000490730 M0QZ92 97 aa23.88■■□□□ 1.41
SYNE4-205ENST00000490730 BACH1O14867 736 aa23.88■■□□□ 1.41
SYNE4-205ENST00000490730 FBXO47Q5MNV8 452 aa23.88■■□□□ 1.41
SYNE4-205ENST00000490730 PLPPR4Q7Z2D5 763 aa23.88■■□□□ 1.41
SYNE4-205ENST00000490730 PLA2G4DQ86XP0 818 aa23.88■■□□□ 1.41
SYNE4-205ENST00000490730 IL17RAQ96F46 866 aa23.88■■□□□ 1.41
SYNE4-205ENST00000490730 SAMD11Q96NU1 681 aa23.88■■□□□ 1.41
SYNE4-205ENST00000490730 POTEB3A0JP26 581 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 FAM86B1E9PN63 330 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 PPFIA3O75145 1194 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 FAM86B2P0C5J1 330 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 RPS6KB1P23443 525 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 AKAP17AQ02040 695 aaKnown RBP23.87■■□□□ 1.41
SYNE4-205ENST00000490730 IER5Q5VY09 327 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 POTEBQ6S5H4 581 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 TSHZ1Q6ZSZ6 1077 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 TMEM192Q8IY95 271 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 CCDC12Q8WUD4 166 aaPredicted RBP23.87■■□□□ 1.41
SYNE4-205ENST00000490730 PHKBQ93100 1093 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 C6orf50Q9HD87 102 aa23.87■■□□□ 1.41
SYNE4-205ENST00000490730 RALGAPA2Q2PPJ7 1873 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 REC8O95072 547 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 CCNE2O96020 404 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 RPLP2P05387 115 aaKnown RBP23.86■■□□□ 1.41
SYNE4-205ENST00000490730 CD52P31358 61 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 GPM6BQ13491 265 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 PTPROQ16827 1216 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 NIPA1Q7RTP0 329 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 REXO1Q8N1G1 1221 aaKnown RBP23.86■■□□□ 1.41
SYNE4-205ENST00000490730 FIBCD1Q8N539 461 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 TRPV2Q9Y5S1 764 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 LOXHD1Q8IVV2 1947 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 COL4A6Q14031 1691 aa23.86■■□□□ 1.41
SYNE4-205ENST00000490730 ENPP3O14638 875 aa23.85■■□□□ 1.41
SYNE4-205ENST00000490730 PSMA5P28066 241 aa23.85■■□□□ 1.41
SYNE4-205ENST00000490730 CTNNB1P35222 781 aa23.85■■□□□ 1.41
SYNE4-205ENST00000490730 FAM160B1Q5W0V3 765 aa23.85■■□□□ 1.41
SYNE4-205ENST00000490730 MRPL38Q96DV4 380 aaKnown RBP23.85■■□□□ 1.41
SYNE4-205ENST00000490730 ZMYND12Q9H0C1 365 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms