RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 SP2Q02086 613 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 ARHGAP1Q07960 439 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 RESP18Q5W5W9 173 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 CEP57L1Q8IYX8 460 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 PCSK9Q8NBP7 692 aaKnown RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 ARRDC4Q8NCT1 418 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 SYMPKQ92797 1274 aaKnown RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 FAM167AQ96KS9 214 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 EIF2AK1Q9BQI3 630 aaKnown RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 POLR3CQ9BUI4 534 aaPredicted RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 KATNAL1Q9BW62 490 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 CCSER1Q9C0I3 900 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.27□□□□□ -0.45
VARS2-210ENST00000490699 SMARCAD1Q9H4L7 1026 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 ZSWIM4Q9H7M6 989 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 ZNF302Q9NR11 478 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 USP25Q9UHP3 1055 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 KINO60870 393 aaKnown RBP12.26□□□□□ -0.45
VARS2-210ENST00000490699 PPFIA4O75335 1185 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 CAPN2P17655 700 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 RPA1P27694 616 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 STAT6P42226 847 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 SYKP43405 635 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 PSMC5P62195 406 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 TRIM32Q13049 653 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 FSCN1Q16658 493 aaKnown RBP12.26□□□□□ -0.45
VARS2-210ENST00000490699 UTP14CQ5TAP6 766 aaKnown RBP12.26□□□□□ -0.45
VARS2-210ENST00000490699 RRAGBQ5VZM2 374 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 PDXDC2PQ6P474 469 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 OTUD6AQ7L8S5 288 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 TPH2Q8IWU9 490 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 IQUBQ8NA54 791 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 TRPV1Q8NER1 839 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 AFG1LQ8WV93 481 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 COPS5Q92905 334 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 GPR20Q99678 358 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 LRRC27Q9C0I9 530 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 RNF208Q9H0X6 261 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 CUEDC2Q9H467 287 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 KCNH3Q9ULD8 1083 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 DNM3Q9UQ16 869 aa12.26□□□□□ -0.45
VARS2-210ENST00000490699 GNEQ9Y223 722 aaKnown RBP12.26□□□□□ -0.45
VARS2-210ENST00000490699 KBTBD13C9JR72 458 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 CCNE2O96020 404 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 MMP3P08254 477 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 MYL3P08590 195 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 CCL5P13501 91 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 STAT5BP51692 787 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 GJA9P57773 515 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 CYP4A11Q02928 519 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 FAM160A1Q05DH4 1040 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 SPIRE1Q08AE8 756 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 IL17AQ16552 155 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 SKOR2Q2VWA4 1001 aaPredicted RBP12.25□□□□□ -0.45
VARS2-210ENST00000490699 HSDL1Q3SXM5 330 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 GNASQ5JWF2 1037 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 SPECC1Q5M775 1068 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 AXDND1Q5T1B0 1012 aaPredicted RBP12.25□□□□□ -0.45
VARS2-210ENST00000490699 GJC2Q5T442 439 aaPredicted RBP12.25□□□□□ -0.45
VARS2-210ENST00000490699 SWSAP1Q6NVH7 229 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 KANK3Q6NY19 840 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 SHC4Q6S5L8 630 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 ABHD15Q6UXT9 468 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 BANK1Q8NDB2 785 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 SYAP1Q96A49 352 aaPredicted RBP12.25□□□□□ -0.45
VARS2-210ENST00000490699 DYDC2Q96IM9 177 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 NACC1Q96RE7 527 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 LXNQ9BS40 222 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 TMEM106CQ9BVX2 250 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 MAGEF1Q9HAY2 307 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 NRBP2Q9NSY0 501 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 ERAP1Q9NZ08 941 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 GABBR1Q9UBS5 961 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 STK17AQ9UEE5 414 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 EMSYQ7Z589 1322 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 SYNRGQ9UMZ2 1314 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 DOCK5Q9H7D0 1870 aa12.25□□□□□ -0.45
VARS2-210ENST00000490699 A0A1B0GVL5 298 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 A6NJR5 290 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 PP2D1A8MPX8 630 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 EML1O00423 815 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 ATG7O95352 703 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 MYCP01106 439 aaPredicted RBP12.24□□□□□ -0.45
VARS2-210ENST00000490699 PFKFB1P16118 471 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 AMPD3Q01432 767 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 GRIN1Q05586 938 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 B3GNT9Q6UX72 402 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 PLPPR4Q7Z2D5 763 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 LOXHD1Q8IVV2 1947 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 EXOC8Q8IYI6 725 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 PDILTQ8N807 584 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 EPSTI1Q96J88 318 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 UPF3AQ9H1J1 476 aaKnown RBP12.24□□□□□ -0.45
VARS2-210ENST00000490699 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
VARS2-210ENST00000490699 DDX19AQ9NUU7 478 aaKnown RBP12.24□□□□□ -0.45
VARS2-210ENST00000490699 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
VARS2-210ENST00000490699 GSTTP1A0A1W2PQM5 241 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 POTEB3A0JP26 581 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms