RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 PITPNM3Q9BZ71 974 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 CRNKL1Q9BZJ0 848 aaKnown RBP12.48□□□□□ -0.41
PCSK9-202ENST00000490692 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 DCDC2CA8MYV0 355 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 RASSF9O75901 435 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 GFPT2O94808 682 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 PBX1P40424 430 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 DYNLL1P63167 89 aaKnown RBP12.48□□□□□ -0.41
PCSK9-202ENST00000490692 FOXO4P98177 505 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 PLCB3Q01970 1234 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 DCAF5Q96JK2 942 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 PBKQ96KB5 322 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 A1CFQ9NQ94 594 aaKnown RBP12.48□□□□□ -0.41
PCSK9-202ENST00000490692 ZNF76P36508 570 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 TFAP4Q01664 338 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 CALCRLQ16602 461 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 TXNRD1Q16881 649 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 CCDC65Q8IXS2 484 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 CFAP61Q8NHU2 1237 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 GLG1Q92896 1179 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 FAM210AQ96ND0 272 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 PLAGL2Q9UPG8 496 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 ABCC12Q96J65 1359 aa12.48□□□□□ -0.41
PCSK9-202ENST00000490692 SKIP12755 728 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 TRAF1Q13077 416 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 MESDQ14696 234 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 DBN1Q16643 649 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 EAPPQ56P03 285 aaPredicted RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 FAM26FQ5R3K3 315 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 KLHDC7AQ5VTJ3 777 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 IQCKQ8N0W5 287 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 TAB3Q8N5C8 712 aaPredicted RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 MIPOL1Q8TD10 442 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 IQCDQ96DY2 449 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 NAF1Q96HR8 494 aaKnown RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 ISCUQ9H1K1 167 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 USP15Q9Y4E8 981 aaPredicted RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 KLHL33A6NCF5 533 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 A8MUI8 341 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 PRPF3O43395 683 aaKnown RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 ITGA4P13612 1032 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 PHKG2P15735 406 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 PRPHP41219 470 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 KLC1Q07866 573 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 CUL3Q13618 768 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 SLC29A2Q14542 456 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 SEPT2Q15019 361 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 ANKRD20A2Q5SQ80 823 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 ANKRD20A1Q5TYW2 823 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 ANKRD20A3Q5VUR7 823 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 SYCP3Q8IZU3 236 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 ENAHQ8N8S7 591 aaPredicted RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 LRRC8CQ8TDW0 803 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 LRRC27Q9C0I9 530 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 H7C1W4 665 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 EEF2P13639 858 aaKnown RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 SERPINB4P48594 390 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 TMED2Q15363 201 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 LONRF1Q17RB8 773 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 C6orf118Q5T5N4 469 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 PDXDC1Q6P996 788 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 UBL4BQ8N7F7 174 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 TGS1Q96RS0 853 aaKnown RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 SMC6Q96SB8 1091 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.414e-15■■□□□ 11.5
PCSK9-202ENST00000490692 TXLNGQ9NUQ3 528 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 ARMCX3Q9UH62 379 aaPredicted RBP12.47□□□□□ -0.41
PCSK9-202ENST00000490692 TRIM33Q9UPN9 1127 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
PCSK9-202ENST00000490692 A0A087X0T9 212 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 SMCO2A6NFE2 343 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 PDE8BO95263 885 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 FAM228BP0C875 321 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 KCNA4P22459 653 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 STAT1P42224 750 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
PCSK9-202ENST00000490692 FKBP3Q00688 224 aaKnown RBP12.46□□□□□ -0.41
PCSK9-202ENST00000490692 PPP2R5BQ15173 497 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.41
PCSK9-202ENST00000490692 FYB2Q5VWT5 728 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 WDR66Q8TBY9 1149 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 PXDNQ92626 1479 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 C21orf2O43822 256 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 CREB3O43889 395 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 BRAFP15056 766 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 PLCG2P16885 1265 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 BYSLQ13895 437 aaKnown RBP12.46□□□□□ -0.41
PCSK9-202ENST00000490692 PDIA6Q15084 440 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 EXOC3L4Q17RC7 722 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 LRIG3Q6UXM1 1119 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 APBB1IPQ7Z5R6 666 aaPredicted RBP12.46□□□□□ -0.41
PCSK9-202ENST00000490692 GBP7Q8N8V2 638 aaPredicted RBP12.46□□□□□ -0.41
PCSK9-202ENST00000490692 B4GALNT2Q8NHY0 566 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 TMOD4Q9NZQ9 345 aa12.46□□□□□ -0.41
PCSK9-202ENST00000490692 TOPAZ1Q8N9V7 1692 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms