RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 ANKS1AQ92625 1134 aa5.72□□□□□ -1.49
PTPRK-213ENST00000490332 BADQ92934 168 aa5.72□□□□□ -1.49
PTPRK-213ENST00000490332 SMARCE1Q969G3 411 aa5.72□□□□□ -1.49
PTPRK-213ENST00000490332 ARHGAP9Q9BRR9 750 aa5.72□□□□□ -1.49
PTPRK-213ENST00000490332 RIOK1Q9BRS2 568 aaKnown RBP5.72□□□□□ -1.49
PTPRK-213ENST00000490332 SH3GLB2Q9NR46 395 aa5.72□□□□□ -1.49
PTPRK-213ENST00000490332 AATFQ9NY61 560 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPRK-213ENST00000490332 ANKIB1Q9P2G1 1089 aa5.72□□□□□ -1.49
PTPRK-213ENST00000490332 CHD7Q9P2D1 2997 aa5.72□□□□□ -1.49
PTPRK-213ENST00000490332 CHD9Q3L8U1 2897 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 ATRNL1Q5VV63 1379 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 TULP1O00294 542 aaPredicted RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 CTIFO43310 598 aaKnown RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 SERPINC1P01008 464 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 CDK11BP21127 795 aaKnown RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 GYG1P46976 350 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 SARSP49591 514 aaKnown RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 RTP1P59025 263 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 PPATQ06203 517 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 NCAPHQ15003 741 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 POSTNQ15063 836 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 ST3GAL2Q16842 350 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 TUSC1Q2TAM9 212 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 LONRF3Q496Y0 759 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 CEP135Q66GS9 1140 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 C15orf52Q6ZUT6 534 aaKnown RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 PRICKLE2Q7Z3G6 844 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 FILIP1Q7Z7B0 1213 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 RAB11FIP4Q86YS3 637 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 CCAR2Q8N163 923 aaKnown RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 MIGA1Q8NAN2 632 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 GTPBP3Q969Y2 492 aaKnown RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 NSUN4Q96CB9 384 aaKnown RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 GSDMAQ96QA5 445 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 CTAGE1Q96RT6 745 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 PHF20Q9BVI0 1012 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 XPO4Q9C0E2 1151 aaKnown RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 SENP6Q9GZR1 1112 aaPredicted RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 TCP11L1Q9NUJ3 509 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 IFNKQ9P0W0 207 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 NRBP1Q9UHY1 535 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 FBXO2Q9UK22 296 aaPredicted RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 DMDP11532 3685 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 TNKSO95271 1327 aa5.71□□□□□ -1.5
PTPRK-213ENST00000490332 MYO5AQ9Y4I1 1855 aaKnown RBP5.71□□□□□ -1.5
PTPRK-213ENST00000490332 NAV2Q8IVL1 2488 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 MED19A0JLT2 244 aaPredicted RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 SHISA8B8ZZ34 492 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 USP17L12C9JPN9 530 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 USP17L21D6R901 530 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 PROB1E7EW31 1015 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 MYL1P05976 194 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 TPM1P09493 284 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 SLFN14P0C7P3 912 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 TOP1P11387 765 aaKnown RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 RXRAP19793 462 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 SMARCA1P28370 1054 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 HOXA7P31268 230 aaPredicted RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 TOB1P50616 345 aaPredicted RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 RNF144AP50876 292 aaPredicted RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 TUBB4BP68371 445 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 TROAPQ12815 778 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 LRMPQ12912 555 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 MORC3Q14149 939 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 RASA3Q14644 834 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 DPCR1Q3MIW9 517 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 CCDC144BQ3MJ40 725 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 FILIP1LQ4L180 1135 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 MAP3K21Q5TCX8 1036 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 ARL6IP4Q66PJ3 421 aaKnown RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 CTR9Q6PD62 1173 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 CCDC174Q6PII3 467 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 C1orf229Q6ZS94 237 aaPredicted RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 HFE2Q6ZVN8 426 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 TMTC3Q6ZXV5 915 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 DGLUCYQ7Z3D6 616 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 TMC6Q7Z403 805 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 ZNF804AQ7Z570 1209 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 PARP9Q8IXQ6 854 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 CCDC144CPQ8IYA2 1237 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 STK11IPQ8N1F8 1099 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 ENAHQ8N8S7 591 aaPredicted RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 IQUBQ8NA54 791 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 ANKRD20A12PQ8NF67 263 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 CELF1Q92879 486 aaKnown RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 AIFM3Q96NN9 605 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 FEZ1Q99689 392 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 SRRTQ9BXP5 876 aaKnown RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 PBX4Q9BYU1 374 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 VEZTQ9HBM0 779 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 CABP5Q9NP86 173 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 INCENPQ9NQS7 918 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 PRDM5Q9NQX1 630 aaPredicted RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 GJB4Q9NTQ9 266 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 RMND1Q9NWS8 449 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 CGNQ9P2M7 1197 aaKnown RBP5.7□□□□□ -1.5
PTPRK-213ENST00000490332 MSRAQ9UJ68 235 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 KCNJ14Q9UNX9 436 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms