RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 MYH13Q9UKX3 1938 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 CTIFO43310 598 aaKnown RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 GSPT1P15170 499 aaKnown RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 TMPOP42166 694 aaKnown RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 CTSKP43235 329 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 HDLBPQ00341 1268 aaKnown RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 EXOSC9Q06265 439 aaKnown RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 APOBRQ0VD83 1088 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 CUL4AQ13619 759 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 SSPNQ14714 243 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 SYCP1Q15431 976 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 MEX3CQ5U5Q3 659 aaKnown RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 ZNF530Q6P9A1 599 aaPredicted RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 GK5Q6ZS86 529 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 TOM1L2Q6ZVM7 507 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 USP48Q86UV5 1035 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 SIRT2Q8IXJ6 389 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 SP8Q8IXZ3 490 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 RBBP8NLQ8NC74 664 aaPredicted RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 SYTL5Q8TDW5 730 aaPredicted RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 MYLIPQ8WY64 445 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 ANKRD7Q92527 254 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 MRRFQ96E11 262 aaKnown RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 DRC1Q96MC2 740 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 SPON2Q9BUD6 331 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 MRIQ9BWK5 157 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 LNPKQ9C0E8 428 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 GCM1Q9NP62 436 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 NOB1Q9ULX3 412 aaKnown RBP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 AFF2P51816 1311 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 ATP10DQ9P241 1426 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 C9IYK1 514 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 EPB41L2O43491 1005 aaKnown RBP4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 CCNFP41002 786 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 SOX9P48436 509 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 PKP1Q13835 747 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 NR0B2Q15466 257 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 CRB2Q5IJ48 1285 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 TTC22Q5TAA0 569 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 TTC6Q86TZ1 520 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 CREG2Q8IUH2 290 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 RASGRP4Q8TDF6 673 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 IP6K1Q92551 441 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 INTS4Q96HW7 963 aaKnown RBP4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 FEZ1Q99689 392 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 TRIT1Q9H3H1 467 aaKnown RBP4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 TSPY26PQ9H489 355 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 DUSP13Q9UII6 198 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 CNOT11Q9UKZ1 510 aaKnown RBP4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 MINPP1Q9UNW1 487 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 KDRP35968 1356 aa4.1□□□□□ -1.75
CRNKL1-203ENST00000490258 COL24A1Q17RW2 1714 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 CACNA1FO60840 1977 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 TEX51A0A1B0GUA7 166 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 SYCE3A1L190 88 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 CYP27B1O15528 508 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 PRAMEF1O95521 474 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 TPM3P06753 285 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 ZNF853P0CG23 659 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 TRHRP34981 398 aaPredicted RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 GJA8P48165 433 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 MCM2P49736 904 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 AFF3P51826 1226 aaKnown RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 FAM193AP78312 1265 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 GABPB1Q06547 395 aaPredicted RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 EGR3Q06889 387 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 SLC20A2Q08357 652 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 NMIQ13287 307 aaPredicted RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 ZYXQ15942 572 aaKnown RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 NFE2L2Q16236 605 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 ATP2B3Q16720 1220 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 ZNF827Q17R98 1081 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 PROSER3Q2NL68 480 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 INTS3Q68E01 1043 aaKnown RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 G2E3Q7L622 706 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 FRMD5Q7Z6J6 570 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 CREBRFQ8IUR6 639 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 PHACTR4Q8IZ21 702 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 C8orf58Q8NAV2 365 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 DAGLBQ8NCG7 672 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 ENOX1Q8TC92 643 aaKnown RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 SREK1Q8WXA9 508 aaKnown RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 NKD1Q969G9 470 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 SYAP1Q96A49 352 aaPredicted RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 ZNF512BQ96KM6 892 aaPredicted RBP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 SPATA32Q96LK8 384 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 SLC6A18Q96N87 628 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 PRDM14Q9GZV8 571 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 RNF32Q9H0A6 362 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 DCTPP1Q9H773 170 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 GPATCH2Q9NW75 528 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 KIF3AQ9Y496 699 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 WDR17Q8IZU2 1322 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 CPDO75976 1380 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 JCADQ9P266 1359 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 ATRNO75882 1429 aa4.09□□□□□ -1.75
CRNKL1-203ENST00000490258 CICQ96RK0 1608 aaPredicted RBP4.09□□□□□ -1.76
CRNKL1-203ENST00000490258 SCAMP3O14828 347 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms