RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 CALM1P0DP23 149 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 CALM2P0DP24 149 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 CALM3P0DP25 149 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 HOXD11P31277 338 aaPredicted RBP18.2■□□□□ 0.5
PLOD3-216ENST00000489927 LIFRP42702 1097 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 IGBP1P78318 339 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 C11orf84Q9BUA3 381 aaPredicted RBP18.2■□□□□ 0.5
PLOD3-216ENST00000489927 LSG1Q9H089 658 aaKnown RBP18.2■□□□□ 0.5
PLOD3-216ENST00000489927 JADE2Q9NQC1 790 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 PCDHA6Q9UN73 950 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 PCDHA8Q9Y5H6 950 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 SLC12A7Q9Y666 1083 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 CDY2AQ9Y6F7 541 aa18.2■□□□□ 0.5
PLOD3-216ENST00000489927 SLC27A2O14975 620 aa18.19■□□□□ 0.5
PLOD3-216ENST00000489927 MAFGO15525 162 aa18.19■□□□□ 0.5
PLOD3-216ENST00000489927 LTBRP36941 435 aa18.19■□□□□ 0.5
PLOD3-216ENST00000489927 MRPS6P82932 125 aaKnown RBP18.19■□□□□ 0.5
PLOD3-216ENST00000489927 BTG3Q14201 252 aaPredicted RBP18.19■□□□□ 0.5
PLOD3-216ENST00000489927 TSHZ1Q6ZSZ6 1077 aa18.19■□□□□ 0.5
PLOD3-216ENST00000489927 TMTC3Q6ZXV5 915 aa18.19■□□□□ 0.5
PLOD3-216ENST00000489927 HEATR3Q7Z4Q2 680 aa18.19■□□□□ 0.5
PLOD3-216ENST00000489927 CLP1Q92989 425 aaKnown RBP18.19■□□□□ 0.5
PLOD3-216ENST00000489927 ZNF689Q96CS4 500 aaPredicted RBP18.19■□□□□ 0.5
PLOD3-216ENST00000489927 PCYT2Q99447 389 aa18.19■□□□□ 0.5
PLOD3-216ENST00000489927 LRRC2Q9BYS8 371 aa18.19■□□□□ 0.5
PLOD3-216ENST00000489927 FAM49AQ9H0Q0 323 aaPredicted RBP18.19■□□□□ 0.5
PLOD3-216ENST00000489927 AGO3Q9H9G7 860 aaKnown RBP18.19■□□□□ 0.5
PLOD3-216ENST00000489927 RWDD3Q9Y3V2 267 aa18.19■□□□□ 0.5
PLOD3-216ENST00000489927 PRR33A8MZF0 331 aa18.18■□□□□ 0.5
PLOD3-216ENST00000489927 ALADP13716 330 aa18.18■□□□□ 0.5
PLOD3-216ENST00000489927 INSRRP14616 1297 aa18.18■□□□□ 0.5
PLOD3-216ENST00000489927 CD52P31358 61 aa18.18■□□□□ 0.5
PLOD3-216ENST00000489927 IRX6P78412 446 aaPredicted RBP18.18■□□□□ 0.5
PLOD3-216ENST00000489927 FANCBQ8NB91 859 aa18.18■□□□□ 0.5
PLOD3-216ENST00000489927 LINC01599Q8WXQ3 324 aa18.18■□□□□ 0.5
PLOD3-216ENST00000489927 LMAN2LQ9H0V9 348 aa18.18■□□□□ 0.5
PLOD3-216ENST00000489927 JPH1Q9HDC5 661 aaPredicted RBP18.18■□□□□ 0.5
PLOD3-216ENST00000489927 KCNH7Q9NS40 1196 aa18.18■□□□□ 0.5
PLOD3-216ENST00000489927 FAM50BQ9Y247 325 aa18.18■□□□□ 0.5
PLOD3-216ENST00000489927 POTEB3A0JP26 581 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 DGKIO75912 1065 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 ZP2Q05996 745 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 HYAL1Q12794 435 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 CTC1Q2NKJ3 1217 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 CREB3L3Q68CJ9 461 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 POTEBQ6S5H4 581 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 MICU3Q86XE3 530 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 CYP2W1Q8TAV3 490 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 SLC9A2Q9UBY0 812 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 C5orf42Q9H799 3197 aa18.17■□□□□ 0.5
PLOD3-216ENST00000489927 KAT6AQ92794 2004 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 ATG2AQ2TAZ0 1938 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 RRN3P2A6NIE6 340 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 NCK2O43639 380 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 CSPG5O95196 566 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 RPLP2P05387 115 aaKnown RBP18.16■□□□□ 0.5
PLOD3-216ENST00000489927 DLX2Q07687 328 aaPredicted RBP18.16■□□□□ 0.5
PLOD3-216ENST00000489927 TMEM62Q0P6H9 643 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 NECTIN1Q15223 517 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 IER5Q5VY09 327 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 RTN4RL1Q86UN2 441 aaPredicted RBP18.16■□□□□ 0.5
PLOD3-216ENST00000489927 SGMS1Q86VZ5 419 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 TRAPPC12Q8WVT3 735 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 MXRA8Q9BRK3 442 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 AZI2Q9H6S1 392 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 ALG13Q9NP73 1137 aaKnown RBP18.16■□□□□ 0.5
PLOD3-216ENST00000489927 PRKAG3Q9UGI9 489 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 TRPC6Q9Y210 931 aa18.16■□□□□ 0.5
PLOD3-216ENST00000489927 C19orf67A6NJJ6 358 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 DCXO43602 365 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 MMP1P03956 469 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 GTF2F1P35269 517 aaKnown RBP eCLIP18.15■□□□□ 0.5
PLOD3-216ENST00000489927 ACTR2P61160 394 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 CAMK1Q14012 370 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 PLCB4Q15147 1175 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 CLUL1Q15846 466 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 WWC2Q6AWC2 1192 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 TYW1BQ6NUM6 668 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 ADHFE1Q8IWW8 467 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 PGBD1Q96JS3 809 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 ESYT1Q9BSJ8 1104 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 PLVAPQ9BX97 442 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 PADI3Q9ULW8 664 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 MRPL42Q9Y6G3 142 aaKnown RBP18.15■□□□□ 0.5
PLOD3-216ENST00000489927 SQORQ9Y6N5 450 aa18.15■□□□□ 0.5
PLOD3-216ENST00000489927 ARP10275 920 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 ITGB3BPQ13352 177 aaPredicted RBP18.14■□□□□ 0.49
PLOD3-216ENST00000489927 PLPPR4Q7Z2D5 763 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 UIMC1Q96RL1 719 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 SDF4Q9BRK5 362 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 FTHL17Q9BXU8 183 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 IGFLR1Q9H665 355 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 ANO2Q9NQ90 1003 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 PLAGL2Q9UPG8 496 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 PCDHA2Q9Y5H9 948 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 TRPV2Q9Y5S1 764 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 NFASCO94856 1347 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 CNTNAP5Q8WYK1 1306 aa18.14■□□□□ 0.49
PLOD3-216ENST00000489927 TTC3P53804 2025 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms