RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 GH2P01242 217 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SLURP2P0DP57 97 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CHMP4BP1P59074 171 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 HERVK_113P62684 666 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 GABPB1Q06547 395 aaPredicted RBP10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SHROOM1Q2M3G4 852 aaPredicted RBP10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CCDC40Q4G0X9 1142 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 LRRC55Q6ZSA7 311 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 C7orf43Q8WVR3 580 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 JAKMIP2Q96AA8 810 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 DNAJC19Q96DA6 116 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 FAM20AQ96MK3 541 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 EIF3CQ99613 913 aaKnown RBP10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CHP1Q99653 195 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 EDEM3Q9BZQ6 932 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 TSGA10Q9BZW7 698 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 NDST4Q9H3R1 872 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 EHMT1Q9H9B1 1298 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KIAA1024Q9UPX6 916 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 REXO2Q9Y3B8 237 aaKnown RBP10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 PITPNM2Q9BZ72 1349 aa10.58□□□□□ -0.71
RAB3GAP1-205ENST00000489858 A0A0U1RQJ8 604 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 E9PMD0 336 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 MEIS2O14770 477 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ATP8B1O43520 1251 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 KRT86O43790 486 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 RXRBP28702 533 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 KLK7P49862 253 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 SLC15A2Q16348 729 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ECM1Q16610 540 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 USH1GQ495M9 461 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 MSS51Q4VC12 460 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ZCWPW2Q504Y3 356 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 NCAPH2Q6IBW4 605 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 RSBN1LQ6PCB5 846 aaPredicted RBP10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 WDR59Q6PJI9 974 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ARHGAP27Q6ZUM4 889 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 SIAH1Q8IUQ4 282 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 TXLNBQ8N3L3 684 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ETNPPLQ8TBG4 499 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ATRIPQ8WXE1 791 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CRYGNQ8WXF5 182 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 SH2D4AQ9H788 454 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 NHEJ1Q9H9Q4 299 aaPredicted RBP10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 SIK3Q9Y2K2 1263 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 COL4A3BPQ9Y5P4 624 aa10.58□□□□□ -0.72
RAB3GAP1-205ENST00000489858 FRMD3A2A2Y4 597 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 PIK3CDO00329 1044 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 PSMD14O00487 310 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CYP3A4P08684 503 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CYP11B2P19099 503 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 HNRNPH3P31942 346 aaKnown RBP10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CIITAP33076 1130 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ZNF76P36508 570 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 STAT3P40763 770 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 VAV2P52735 878 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 FKBP3Q00688 224 aaKnown RBP10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CKAP4Q07065 602 aaKnown RBP10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 BRD3Q15059 726 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 LRRC41Q15345 812 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 DLGAP5Q15398 846 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 SPA17Q15506 151 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 PRR16Q569H4 304 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CCDC122Q5T0U0 273 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 RTKN2Q8IZC4 609 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 KCTD17Q8N5Z5 321 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 NEK11Q8NG66 645 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 FAM151AQ8WW52 585 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 TANGO6Q9C0B7 1094 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 NUCKS1Q9H1E3 243 aaKnown RBP10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ZNF446Q9NWS9 450 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 FAM53CQ9NYF3 392 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 PRR12Q9ULL5 1215 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 GUCA1BQ9UMX6 200 aa10.57□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ATAD5Q96QE3 1844 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CTAGE15A4D2H0 777 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 RASSF10A6NK89 507 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 YDJCA8MPS7 323 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 TCP10L2B9ZVM9 353 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 TRAF5O00463 557 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 C21orf2O43822 256 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 USO1O60763 962 aaKnown RBP10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 MED24O75448 989 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 TUBBP07437 444 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CTAGE8P0CG41 777 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 RPA1P27694 616 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 STAT2P52630 851 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 SNAP25P60880 206 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 EDRF1Q3B7T1 1238 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 HERC4Q5GLZ8 1057 aaPredicted RBP10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 FKBP1CQ5VVH2 108 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CACNA2D4Q7Z3S7 1137 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CTAGE6Q86UF2 777 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CTAGE4Q8IX94 777 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 ZC3H3Q8IXZ2 948 aaKnown RBP10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 CYP4X1Q8N118 509 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 GJA10Q969M2 543 aa10.56□□□□□ -0.72
RAB3GAP1-205ENST00000489858 LENG9Q96B70 501 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms