RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	MIS18BP1	Q6P0N0	1132 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	LENG9	Q96B70	501 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	UIMC1	Q96RL1	719 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	LLPH	Q9BRT6	129 aa	Known RBP	12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	GJB4	Q9NTQ9	266 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	MSH4	O15457	936 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	ST18	O60284	1047 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	CAND2	O75155	1236 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	CYP3A7	P24462	503 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	KRT2	P35908	639 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	INF2	Q27J81	1249 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	TRIM71	Q2Q1W2	868 aa	Known RBP	12.56	□□□□□ -0.4
GGA1-222	ENST00000489772		Q4G0T1	1027 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	FAM160B1	Q5W0V3	765 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	MOXD1	Q6UVY6	613 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	ABHD15	Q6UXT9	468 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	CCDC83	Q8IWF9	413 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	LMBR1	Q8WVP7	490 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	PCYT2	Q99447	389 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	RIT2	Q99578	217 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	TRPC6	Q9Y210	931 aa		12.56	□□□□□ -0.4
GGA1-222	ENST00000489772	LAMA2	P24043	3122 aa	Known RBP	12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	IGKV6D-21	A0A0A0MT36	114 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	RRN3P2	A6NIE6	340 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	ZBBX	A8MT70	800 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	RSPH10B2	B2RC85	870 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	EDIL3	O43854	480 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	TDP2	O95551	362 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	RSPH10B	P0C881	870 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	ST3GAL1	Q11201	340 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	GRIK4	Q16099	956 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	LETM2	Q2VYF4	491 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	ZNF618	Q5T7W0	954 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	SWSAP1	Q6NVH7	229 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	TAF2	Q6P1X5	1199 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	PIK3AP1	Q6ZUJ8	805 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	OXER1	Q8TDS5	423 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	WNT8B	Q93098	351 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	VWCE	Q96DN2	955 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	ZNF302	Q9NR11	478 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	DDX25	Q9UHL0	483 aa	Known RBP	12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	SAMM50	Q9Y512	469 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	PCDHA10	Q9Y5I2	948 aa		12.55	□□□□□ -0.4
GGA1-222	ENST00000489772	POTEB3	A0JP26	581 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	WDR64	B1ANS9	1081 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	GAS7	O60861	476 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	PSAP	P07602	524 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	INSRR	P14616	1297 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	IGBP1	P78318	339 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	ADAM17	P78536	824 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	PLCB4	Q15147	1175 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	LRCH2	Q5VUJ6	765 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	PDXDC2P	Q6P474	469 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	POTEB	Q6S5H4	581 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	NEK8	Q86SG6	692 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	RSPH3	Q86UC2	560 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	DEFB123	Q8N688	67 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	SLC5A5	Q92911	643 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	MBOAT7	Q96N66	472 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	NAP1L4	Q99733	375 aa	Known RBP	12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	TUBE1	Q9UJT0	475 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	SLC4A7	Q9Y6M7	1214 aa		12.54	□□□□□ -0.4
GGA1-222	ENST00000489772	MBLAC1	A4D2B0	266 aa	Predicted RBP	12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	CCNT1	O60563	726 aa	Known RBP	12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	NBN	O60934	754 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	BAIAP3	O94812	1187 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	CXCL10	P02778	98 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	MMP1	P03956	469 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	RPLP2	P05387	115 aa	Known RBP	12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	PRR29	P0C7W0	189 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	GCFC2	P16383	781 aa	Known RBP	12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	JAK3	P52333	1124 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	FOSB	P53539	338 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	HMGN5	P82970	282 aa	Known RBP	12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	SAFB	Q15424	915 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	MARCH8	Q5T0T0	291 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	ZNF697	Q5TEC3	545 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	KRT40	Q6A162	431 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	PPP4R3A	Q6IN85	833 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	TRAF7	Q6Q0C0	670 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	CKAP2L	Q8IYA6	745 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	ATP8B4	Q8TF62	1192 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	TBC1D32	Q96NH3	1257 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	TEKT3	Q9BXF9	490 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	DISC1	Q9NRI5	854 aa		12.53	□□□□□ -0.4
GGA1-222	ENST00000489772	BTBD18	B2RXH4	712 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	CHMP2A	O43633	222 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	HBP1	O60381	514 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	CTSH	P09668	335 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	ATP2A2	P16615	1042 aa	Known RBP	12.52	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms