RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 DHX15O43143 795 aaKnown RBP15.15■□□□□ 0.02
CCL28-202ENST00000489442 GAS7O60861 476 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 ATG7O95352 703 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 PARNO95453 639 aaKnown RBP15.15■□□□□ 0.02
CCL28-202ENST00000489442 TDP2O95551 362 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 CCNE2O96020 404 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 ACTN1P12814 892 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 IGBP1P78318 339 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 HIC1Q14526 733 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCL28-202ENST00000489442 LRCH2Q5VUJ6 765 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 ZNF746Q6NUN9 644 aaPredicted RBP15.15■□□□□ 0.02
CCL28-202ENST00000489442 SWSAP1Q6NVH7 229 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 PLPPR4Q7Z2D5 763 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 NEK8Q86SG6 692 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 CKAP2LQ8IYA6 745 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 FAM184AQ8NB25 1140 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 OXER1Q8TDS5 423 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 LMBR1Q8WVP7 490 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 MYO9BQ13459 2157 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.14■□□□□ 0.01
CCL28-202ENST00000489442 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.14■□□□□ 0.01
CCL28-202ENST00000489442 RRN3P2A6NIE6 340 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 MARCH6O60337 910 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 PSAPP07602 524 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 HOXC8P31273 242 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 SLC26A2P50443 739 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 HMGN5P82970 282 aaKnown RBP15.14■□□□□ 0.01
CCL28-202ENST00000489442 GRIK4Q16099 956 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 Q4G0T1 1027 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 ZNF618Q5T7W0 954 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 KRT40Q6A162 431 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 GPR153Q6NV75 609 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 PDXDC2PQ6P474 469 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 MOXD1Q6UVY6 613 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 ABHD15Q6UXT9 468 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 SMAP1Q8IYB5 467 aaPredicted RBP15.14■□□□□ 0.01
CCL28-202ENST00000489442 HERVK_113Q902F9 699 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 LENG9Q96B70 501 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 TBC1D32Q96NH3 1257 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 PCYT2Q99447 389 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 RIT2Q99578 217 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 NAP1L4Q99733 375 aaKnown RBP15.14■□□□□ 0.01
CCL28-202ENST00000489442 TEKT3Q9BXF9 490 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 ZNF302Q9NR11 478 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 DDX25Q9UHL0 483 aaKnown RBP15.14■□□□□ 0.01
CCL28-202ENST00000489442 PCDHA10Q9Y5I2 948 aa15.14■□□□□ 0.01
CCL28-202ENST00000489442 EVPLQ92817 2033 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 CYP3A7-CYP3A51PA0A087WV96 503 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 POTEB3A0JP26 581 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 RSPH10B2B2RC85 870 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 EDIL3O43854 480 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 CCNT1O60563 726 aaKnown RBP15.13■□□□□ 0.01
CCL28-202ENST00000489442 MMP1P03956 469 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 RSPH10BP0C881 870 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 INSRRP14616 1297 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 GCFC2P16383 781 aaKnown RBP15.13■□□□□ 0.01
CCL28-202ENST00000489442 CYP3A7P24462 503 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 SMAD3P84022 425 aaKnown RBP15.13■□□□□ 0.01
CCL28-202ENST00000489442 RBL2Q08999 1139 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 ST3GAL1Q11201 340 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 NR5A1Q13285 461 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 PLCB4Q15147 1175 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 POTEBQ6S5H4 581 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 RSPH3Q86UC2 560 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 WNT8BQ93098 351 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 C8orf76Q96K31 380 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 TUBE1Q9UJT0 475 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 SLC4A7Q9Y6M7 1214 aa15.13■□□□□ 0.01
CCL28-202ENST00000489442 WDR64B1ANS9 1081 aa15.12■□□□□ 0.01
CCL28-202ENST00000489442 BTBD18B2RXH4 712 aa15.12■□□□□ 0.01
CCL28-202ENST00000489442 CHMP2AO43633 222 aa15.12■□□□□ 0.01
CCL28-202ENST00000489442 MCM2P49736 904 aa15.12■□□□□ 0.01
CCL28-202ENST00000489442 GUCY1B3Q02153 619 aa15.12■□□□□ 0.01
CCL28-202ENST00000489442 GNL2Q13823 731 aaKnown RBP15.12■□□□□ 0.01
CCL28-202ENST00000489442 TRIM71Q2Q1W2 868 aaKnown RBP15.12■□□□□ 0.01
CCL28-202ENST00000489442 TAF2Q6P1X5 1199 aa15.12■□□□□ 0.01
CCL28-202ENST00000489442 TRMT1LQ7Z2T5 733 aaKnown RBP15.12■□□□□ 0.01
CCL28-202ENST00000489442 CCDC60Q8IWA6 550 aaPredicted RBP15.12■□□□□ 0.01
CCL28-202ENST00000489442 DIS3L2Q8IYB7 885 aaKnown RBP15.12■□□□□ 0.01
CCL28-202ENST00000489442 DEFB123Q8N688 67 aa15.12■□□□□ 0.01
CCL28-202ENST00000489442 SLC5A5Q92911 643 aa15.12■□□□□ 0.01
CCL28-202ENST00000489442 DISC1Q9NRI5 854 aa15.12■□□□□ 0.01
CCL28-202ENST00000489442 IGKV6D-21A0A0A0MT36 114 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 HBP1O60381 514 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 CAND2O75155 1236 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 CTSHP09668 335 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 SFNP31947 248 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 JAK3P52333 1124 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 ADAM17P78536 824 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 PPP4R3AQ6IN85 833 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 MIER3Q7Z3K6 550 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 GJA10Q969M2 543 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 BACH2Q9BYV9 841 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 CXXC1Q9P0U4 656 aaPredicted RBP15.11■□□□□ 0.01
CCL28-202ENST00000489442 GABBR1Q9UBS5 961 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 KIF3AQ9Y496 699 aa15.11■□□□□ 0.01
CCL28-202ENST00000489442 SLC37A4O43826 429 aa15.1■□□□□ 0.01
CCL28-202ENST00000489442 BAG4O95429 457 aaKnown RBP15.1■□□□□ 0.01
CCL28-202ENST00000489442 SLC34A2O95436 690 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms