RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 RASGRP4Q8TDF6 673 aa21.57■■□□□ 1.04
MRPL55-230ENST00000489430 ZNF576Q9H609 170 aa21.57■■□□□ 1.04
MRPL55-230ENST00000489430 TANC1Q9C0D5 1861 aa21.57■■□□□ 1.04
MRPL55-230ENST00000489430 GRXCR1A8MXD5 290 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 CCNE2O96020 404 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 IKBKEQ14164 716 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 NPY5RQ15761 445 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 FAM160B1Q5W0V3 765 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 MIS18BP1Q6P0N0 1132 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 RSPH3Q86UC2 560 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 GTF3C6Q969F1 213 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 LENG9Q96B70 501 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 FAM161BQ96MY7 647 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 CDX2Q99626 313 aaPredicted RBP21.56■■□□□ 1.04
MRPL55-230ENST00000489430 TCEAL9Q9UHQ7 104 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 TUBE1Q9UJT0 475 aa21.56■■□□□ 1.04
MRPL55-230ENST00000489430 CYP3A7-CYP3A51PA0A087WV96 503 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 CYP3A7P24462 503 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 MARK3P27448 753 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 PBX2P40425 430 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 KCNJ6P48051 423 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 MBTPS1Q14703 1052 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 ME3Q16798 604 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 KRT25Q7Z3Z0 450 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 TBCKQ8TEA7 893 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 RIT2Q99578 217 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 PHF20Q9BVI0 1012 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 SLC28A3Q9HAS3 691 aa21.55■■□□□ 1.04
MRPL55-230ENST00000489430 KIF28PB7ZC32 967 aa21.54■■□□□ 1.04
MRPL55-230ENST00000489430 INSRRP14616 1297 aa21.54■■□□□ 1.04
MRPL55-230ENST00000489430 C8orf34Q49A92 452 aa21.54■■□□□ 1.04
MRPL55-230ENST00000489430 Q4G0T1 1027 aa21.54■■□□□ 1.04
MRPL55-230ENST00000489430 MARCH8Q5T0T0 291 aa21.54■■□□□ 1.04
MRPL55-230ENST00000489430 IL27Q8NEV9 243 aa21.54■■□□□ 1.04
MRPL55-230ENST00000489430 ORC3Q9UBD5 711 aaPredicted RBP21.54■■□□□ 1.04
MRPL55-230ENST00000489430 TRPC6Q9Y210 931 aa21.54■■□□□ 1.04
MRPL55-230ENST00000489430 POTEB3A0JP26 581 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 EDIL3O43854 480 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 HBP1O60381 514 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 CTDNEP1O95476 244 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 WDR5P61964 334 aaKnown RBP21.53■■□□□ 1.04
MRPL55-230ENST00000489430 PLCB4Q15147 1175 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 NONOQ15233 471 aaKnown RBP eCLIP21.53■■□□□ 1.04
MRPL55-230ENST00000489430 PLEKHG4Q58EX7 1191 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 POTEBQ6S5H4 581 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 FAM43BQ6ZT52 329 aaPredicted RBP21.53■■□□□ 1.04
MRPL55-230ENST00000489430 HERC6Q8IVU3 1022 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 MBOAT7Q96N66 472 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 AIFM3Q96NN9 605 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 PCDHA10Q9Y5I2 948 aa21.53■■□□□ 1.04
MRPL55-230ENST00000489430 COL6A3P12111 3177 aa21.52■■□□□ 1.04
MRPL55-230ENST00000489430 BACH1O14867 736 aa21.52■■□□□ 1.04
MRPL55-230ENST00000489430 PSAPP07602 524 aa21.52■■□□□ 1.04
MRPL55-230ENST00000489430 GRIN2CQ14957 1233 aa21.52■■□□□ 1.04
MRPL55-230ENST00000489430 ATP8B4Q8TF62 1192 aa21.52■■□□□ 1.04
MRPL55-230ENST00000489430 SEPT8Q92599 483 aa21.52■■□□□ 1.04
MRPL55-230ENST00000489430 APBB2Q92870 758 aa21.52■■□□□ 1.04
MRPL55-230ENST00000489430 ZNF302Q9NR11 478 aa21.52■■□□□ 1.04
MRPL55-230ENST00000489430 YBX2Q9Y2T7 364 aaKnown RBP21.52■■□□□ 1.04
MRPL55-230ENST00000489430 PCDHA2Q9Y5H9 948 aa21.52■■□□□ 1.04
MRPL55-230ENST00000489430 MAFBQ9Y5Q3 323 aaPredicted RBP21.52■■□□□ 1.04
MRPL55-230ENST00000489430 COL1A2P08123 1366 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 WDR64B1ANS9 1081 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 DDX39AO00148 427 aaKnown RBP21.51■■□□□ 1.03
MRPL55-230ENST00000489430 MSH4O15457 936 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 SFNP31947 248 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 PDXDC2PQ6P474 469 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 CCDC60Q8IWA6 550 aaPredicted RBP21.51■■□□□ 1.03
MRPL55-230ENST00000489430 NME8Q8N427 588 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 DBF4BQ8NFT6 615 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 RDM1Q8NG50 284 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 SLC5A5Q92911 643 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 NAP1L4Q99733 375 aaKnown RBP21.51■■□□□ 1.03
MRPL55-230ENST00000489430 KCNJ14Q9UNX9 436 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 LIMCH1Q9UPQ0 1083 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 SQORQ9Y6N5 450 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 DOCK5Q9H7D0 1870 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 CDH23Q9H251 3354 aa21.51■■□□□ 1.03
MRPL55-230ENST00000489430 CCDC194A0A1B0GVG4 234 aa21.5■■□□□ 1.03
MRPL55-230ENST00000489430 FDPSP14324 419 aaKnown RBP21.5■■□□□ 1.03
MRPL55-230ENST00000489430 GCFC2P16383 781 aaKnown RBP21.5■■□□□ 1.03
MRPL55-230ENST00000489430 RABGGTBP53611 331 aa21.5■■□□□ 1.03
MRPL55-230ENST00000489430 MKRN4PQ13434 485 aaPredicted RBP21.5■■□□□ 1.03
MRPL55-230ENST00000489430 ZNF484Q5JVG2 852 aa21.5■■□□□ 1.03
MRPL55-230ENST00000489430 IER5Q5VY09 327 aa21.5■■□□□ 1.03
MRPL55-230ENST00000489430 SWSAP1Q6NVH7 229 aa21.5■■□□□ 1.03
MRPL55-230ENST00000489430 NECAB1Q8N987 351 aa21.5■■□□□ 1.03
MRPL55-230ENST00000489430 BBXQ8WY36 941 aaPredicted RBP21.5■■□□□ 1.03
MRPL55-230ENST00000489430 NKX2-4Q9H2Z4 354 aa21.5■■□□□ 1.03
MRPL55-230ENST00000489430 SCN5AQ14524 2016 aa21.5■■□□□ 1.03
MRPL55-230ENST00000489430 TRIP12Q14669 1992 aaPredicted RBP21.49■■□□□ 1.03
MRPL55-230ENST00000489430 SMIM35A0A1B0GVV1 85 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 GAS7O60861 476 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 CHRNA1P02708 482 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 CTSHP09668 335 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 RBM25P49756 843 aaKnown RBP21.49■■□□□ 1.03
MRPL55-230ENST00000489430 JAK3P52333 1124 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 MGAT3Q09327 533 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 PPP2R2DQ66LE6 453 aa21.49■■□□□ 1.03
MRPL55-230ENST00000489430 PPP4R3AQ6IN85 833 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms