RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 USP27XA6NNY8 438 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 EML1O00423 815 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 CALUO43852 315 aaPredicted RBP12□□□□□ -0.49
ITSN1-231ENST00000489261 COBLO75128 1261 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 STAM2O75886 525 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 P4HBP07237 508 aaKnown RBP12□□□□□ -0.49
ITSN1-231ENST00000489261 CCDC175P0C221 793 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 HSPA8P11142 646 aaKnown RBP12□□□□□ -0.49
ITSN1-231ENST00000489261 KRT9P35527 623 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 ETF1P62495 437 aaKnown RBP12□□□□□ -0.49
ITSN1-231ENST00000489261 MAP3K9P80192 1104 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 SYCP1Q15431 976 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 BMT2Q1RMZ1 405 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 ZCWPW2Q504Y3 356 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 POTEGQ6S5H5 508 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 POTEEQ6S8J3 1075 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 RNF207Q6ZRF8 634 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 REXO1L1PQ8IX06 675 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 CPXCR1Q8N123 301 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 RDM1Q8NG50 284 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 CPLX3Q8WVH0 158 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 CCDC102AQ96A19 550 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 ZIC5Q96T25 663 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 TIPINQ9BVW5 301 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 ABHD10Q9NUJ1 306 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 ZNHIT6Q9NWK9 470 aaKnown RBP12□□□□□ -0.49
ITSN1-231ENST00000489261 FAM184BQ9ULE4 1060 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 ODF2LQ9ULJ1 636 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 AFG3L2Q9Y4W6 797 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 PHLPP2Q6ZVD8 1323 aa12□□□□□ -0.49
ITSN1-231ENST00000489261 PES1O00541 588 aaKnown RBP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 NFIBO00712 420 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 PDXKO00764 312 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 CETN3O15182 167 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 EIF3DO15371 548 aaKnown RBP eCLIP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 DKC1O60832 514 aaKnown RBP eCLIP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 TBCAO75347 108 aaKnown RBP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 LYPLA2O95372 231 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 ARP10275 920 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 RPL13P26373 211 aaKnown RBP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 SFNP31947 248 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 NF2P35240 595 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 ZNF157P51786 506 aaPredicted RBP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 PSMC6P62333 389 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 ZBED6P86452 979 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 CDK17Q00537 523 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 PABPC4Q13310 644 aaKnown RBP eCLIP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 NFIL3Q16649 462 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 RINT1Q6NUQ1 792 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 LRRC55Q6ZSA7 311 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 MOB2Q70IA6 237 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 EPM2AIP1Q7L775 607 aaPredicted RBP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 MIER3Q7Z3K6 550 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 NLRX1Q86UT6 975 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 RASAL3Q86YV0 1011 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 TPH2Q8IWU9 490 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 DYDC2Q96IM9 177 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 NDST4Q9H3R1 872 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 ZSWIM4Q9H7M6 989 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 AGO4Q9HCK5 861 aaKnown RBP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 OLFML3Q9NRN5 406 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 TCEAL9Q9UHQ7 104 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 DBR1Q9UK59 544 aaKnown RBP11.99□□□□□ -0.49
ITSN1-231ENST00000489261 TRAF3IP3Q9Y228 551 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 UBE4BO95155 1302 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 CASP8AP2Q9UKL3 1982 aa11.99□□□□□ -0.49
ITSN1-231ENST00000489261 DOCK1Q14185 1865 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 B4DLN1 442 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 RIOK3O14730 519 aaKnown RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 PPP1R12BO60237 982 aaPredicted RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 USP2O75604 605 aaPredicted RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 FAM13AO94988 1023 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 MAPTP10636 758 aaKnown RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 TAL1P17542 331 aaPredicted RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 ITGB5P18084 799 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 GUCY2CP25092 1073 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 FXR1P51114 621 aaKnown RBP eCLIP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 JAK3P52333 1124 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 RPS6P62753 249 aaKnown RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 TUBB2AQ13885 445 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 KNOP1Q1ED39 458 aaKnown RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 MIIPQ5JXC2 388 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 ARHGEF16Q5VV41 709 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 C1orf186Q6ZWK4 172 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 MTERF4Q7Z6M4 381 aaKnown RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 CCDC170Q8IYT3 715 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 REPS2Q8NFH8 660 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 SCFD1Q8WVM8 642 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 HPS3Q969F9 1004 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 ZKSCAN4Q969J2 545 aaPredicted RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 ATG4CQ96DT6 458 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 CDHR1Q96JP9 859 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 TAAR1Q96RJ0 339 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 RMDN3Q96TC7 470 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 DNAJC7Q99615 494 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 TUBB2BQ9BVA1 445 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 NUCKS1Q9H1E3 243 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms