RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 RABGGTBP53611 331 aa24.03■■□□□ 1.44
LIME1-207ENST00000489212 ST3GAL1Q11201 340 aa24.03■■□□□ 1.44
LIME1-207ENST00000489212 GRIK4Q16099 956 aa24.03■■□□□ 1.44
LIME1-207ENST00000489212 GALNT17Q6IS24 598 aa24.03■■□□□ 1.44
LIME1-207ENST00000489212 ABHD15Q6UXT9 468 aa24.03■■□□□ 1.44
LIME1-207ENST00000489212 RUFY4Q6ZNE9 571 aa24.03■■□□□ 1.44
LIME1-207ENST00000489212 KIF2CQ99661 725 aa24.03■■□□□ 1.44
LIME1-207ENST00000489212 AZI2Q9H6S1 392 aa24.03■■□□□ 1.44
LIME1-207ENST00000489212 ORC3Q9UBD5 711 aaPredicted RBP24.03■■□□□ 1.44
LIME1-207ENST00000489212 TMEM265A0A087WTH1 108 aa24.02■■□□□ 1.44
LIME1-207ENST00000489212 RSPH10B2B2RC85 870 aa24.02■■□□□ 1.44
LIME1-207ENST00000489212 RSPH10BP0C881 870 aa24.02■■□□□ 1.44
LIME1-207ENST00000489212 STAT5BP51692 787 aa24.02■■□□□ 1.44
LIME1-207ENST00000489212 PLCB4Q15147 1175 aa24.02■■□□□ 1.44
LIME1-207ENST00000489212 MARCH8Q5T0T0 291 aa24.02■■□□□ 1.44
LIME1-207ENST00000489212 PLPPR4Q7Z2D5 763 aa24.02■■□□□ 1.44
LIME1-207ENST00000489212 OSBPL7Q9BZF2 842 aa24.02■■□□□ 1.44
LIME1-207ENST00000489212 YBX2Q9Y2T7 364 aaKnown RBP24.02■■□□□ 1.44
LIME1-207ENST00000489212 MYO9BQ13459 2157 aa24.01■■□□□ 1.43
LIME1-207ENST00000489212 MBLAC1A4D2B0 266 aaPredicted RBP24.01■■□□□ 1.43
LIME1-207ENST00000489212 MSH4O15457 936 aa24.01■■□□□ 1.43
LIME1-207ENST00000489212 CTSHP09668 335 aa24.01■■□□□ 1.43
LIME1-207ENST00000489212 INSRRP14616 1297 aa24.01■■□□□ 1.43
LIME1-207ENST00000489212 ATP2A2P16615 1042 aaKnown RBP24.01■■□□□ 1.43
LIME1-207ENST00000489212 CNKSR3Q6P9H4 555 aa24.01■■□□□ 1.43
LIME1-207ENST00000489212 CCDC60Q8IWA6 550 aaPredicted RBP24.01■■□□□ 1.43
LIME1-207ENST00000489212 NSUN7Q8NE18 718 aaKnown RBP24.01■■□□□ 1.43
LIME1-207ENST00000489212 ZBTB10Q96DT7 871 aa24.01■■□□□ 1.43
LIME1-207ENST00000489212 CDX2Q99626 313 aaPredicted RBP24.01■■□□□ 1.43
LIME1-207ENST00000489212 TBC1D22BQ9NU19 505 aa24.01■■□□□ 1.43
LIME1-207ENST00000489212 STXBP5LQ9Y2K9 1186 aa24.01■■□□□ 1.43
LIME1-207ENST00000489212 CHD7Q9P2D1 2997 aa24■■□□□ 1.43
LIME1-207ENST00000489212 PTPRSQ13332 1948 aa24■■□□□ 1.43
LIME1-207ENST00000489212 BAIAP3O94812 1187 aa24■■□□□ 1.43
LIME1-207ENST00000489212 MYOGP15173 224 aa24■■□□□ 1.43
LIME1-207ENST00000489212 IGBP1P78318 339 aa24■■□□□ 1.43
LIME1-207ENST00000489212 OXER1Q8TDS5 423 aa24■■□□□ 1.43
LIME1-207ENST00000489212 C22orf23Q9BZE7 217 aa24■■□□□ 1.43
LIME1-207ENST00000489212 ZNF576Q9H609 170 aa24■■□□□ 1.43
LIME1-207ENST00000489212 TUBE1Q9UJT0 475 aa24■■□□□ 1.43
LIME1-207ENST00000489212 JAK2O60674 1132 aa23.99■■□□□ 1.43
LIME1-207ENST00000489212 CAND2O75155 1236 aa23.99■■□□□ 1.43
LIME1-207ENST00000489212 TDP2O95551 362 aa23.99■■□□□ 1.43
LIME1-207ENST00000489212 RAB30Q15771 203 aa23.99■■□□□ 1.43
LIME1-207ENST00000489212 ZNF746Q6NUN9 644 aaPredicted RBP23.99■■□□□ 1.43
LIME1-207ENST00000489212 TRAPPC12Q8WVT3 735 aa23.99■■□□□ 1.43
LIME1-207ENST00000489212 GJA10Q969M2 543 aa23.99■■□□□ 1.43
LIME1-207ENST00000489212 NKX2-4Q9H2Z4 354 aa23.99■■□□□ 1.43
LIME1-207ENST00000489212 MSRAQ9UJ68 235 aa23.99■■□□□ 1.43
LIME1-207ENST00000489212 TRPC6Q9Y210 931 aa23.99■■□□□ 1.43
LIME1-207ENST00000489212 CYP3A7-CYP3A51PA0A087WV96 503 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 BACH1O14867 736 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 CYP3A7P24462 503 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 WDR5P61964 334 aaKnown RBP23.98■■□□□ 1.43
LIME1-207ENST00000489212 GRIN2CQ14957 1233 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 NONOQ15233 471 aaKnown RBP eCLIP23.98■■□□□ 1.43
LIME1-207ENST00000489212 INF2Q27J81 1249 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 Q4G0T1 1027 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 SWSAP1Q6NVH7 229 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 MIS18BP1Q6P0N0 1132 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 KRT25Q7Z3Z0 450 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 SLC9A7Q96T83 725 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 EYSQ5T1H1 3165 aa23.98■■□□□ 1.43
LIME1-207ENST00000489212 POTEB3A0JP26 581 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 RRN3P2A6NIE6 340 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 XBP1P17861 261 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 ATP4AP20648 1035 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 KRT76Q01546 638 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 FAM26DQ5JW98 314 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 TAF2Q6P1X5 1199 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 POTEBQ6S5H4 581 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 RPAINQ86UA6 219 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 DBF4BQ8NFT6 615 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 PHOSPHO2Q8TCD6 241 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 MYLIPQ8WY64 445 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 WASF1Q92558 559 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 SLC5A5Q92911 643 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 MBOAT7Q96N66 472 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 ZNF302Q9NR11 478 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 LIMCH1Q9UPQ0 1083 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 PCDHA11Q9Y5I1 949 aa23.97■■□□□ 1.43
LIME1-207ENST00000489212 MYH9P35579 1960 aaKnown RBP23.96■■□□□ 1.43
LIME1-207ENST00000489212 WDR81Q562E7 1941 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 SIP14410 1827 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 CHRNA1P02708 482 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 SLC26A2P50443 739 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 DEFB103AP81534 67 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 PLEKHG4Q58EX7 1191 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 EARS2Q5JPH6 523 aaKnown RBP23.96■■□□□ 1.43
LIME1-207ENST00000489212 FAM160B1Q5W0V3 765 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 PDXDC2PQ6P474 469 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 TMCO2Q7Z6W1 182 aaPredicted RBP23.96■■□□□ 1.43
LIME1-207ENST00000489212 SMAP1Q8IYB5 467 aaPredicted RBP23.96■■□□□ 1.43
LIME1-207ENST00000489212 DNAJB3Q8WWF6 145 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 PCDHA10Q9Y5I2 948 aa23.96■■□□□ 1.43
LIME1-207ENST00000489212 ABHD14A-ACY1A0A1B0GW23 586 aa23.95■■□□□ 1.42
LIME1-207ENST00000489212 KCNJ6P48051 423 aa23.95■■□□□ 1.42
LIME1-207ENST00000489212 RBM25P49756 843 aaKnown RBP23.95■■□□□ 1.42
LIME1-207ENST00000489212 MGAT3Q09327 533 aa23.95■■□□□ 1.42
LIME1-207ENST00000489212 MKRN4PQ13434 485 aaPredicted RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms