RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 FIBPO43427 364 aa18.71■□□□□ 0.59
USP48-210ENST00000489108 PPFIA3O75145 1194 aa18.71■□□□□ 0.59
USP48-210ENST00000489108 STAM2O75886 525 aa18.71■□□□□ 0.59
USP48-210ENST00000489108 SDSP20132 328 aa18.71■□□□□ 0.59
USP48-210ENST00000489108 PAN2Q504Q3 1202 aaKnown RBP18.71■□□□□ 0.59
USP48-210ENST00000489108 RSPH3Q86UC2 560 aa18.71■□□□□ 0.59
USP48-210ENST00000489108 CMTR2Q8IYT2 770 aaKnown RBP18.71■□□□□ 0.59
USP48-210ENST00000489108 CRIPAKQ8N1N5 446 aa18.71■□□□□ 0.59
USP48-210ENST00000489108 UBAC1Q9BSL1 405 aa18.71■□□□□ 0.59
USP48-210ENST00000489108 CDY2AQ9Y6F7 541 aa18.71■□□□□ 0.59
USP48-210ENST00000489108 LAMA4Q16363 1823 aa18.71■□□□□ 0.59
USP48-210ENST00000489108 CACNA1HO95180 2353 aa18.7■□□□□ 0.58
USP48-210ENST00000489108 PER2O15055 1255 aa18.7■□□□□ 0.58
USP48-210ENST00000489108 CD52P31358 61 aa18.7■□□□□ 0.58
USP48-210ENST00000489108 RBM10P98175 930 aaKnown RBP18.7■□□□□ 0.58
USP48-210ENST00000489108 TSHZ1Q6ZSZ6 1077 aa18.7■□□□□ 0.58
USP48-210ENST00000489108 KRT23Q9C075 422 aa18.7■□□□□ 0.58
USP48-210ENST00000489108 TLE6Q9H808 572 aa18.7■□□□□ 0.58
USP48-210ENST00000489108 PTPRZ1P23471 2315 aaPredicted RBP18.69■□□□□ 0.58
USP48-210ENST00000489108 PLXNA4Q9HCM2 1894 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 H0Y858 1186 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 TRAF1Q13077 416 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 SEC23AQ15436 765 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 GRIK4Q16099 956 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 MARCH8Q5T0T0 291 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 NPAS4Q8IUM7 802 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 MICAL1Q8TDZ2 1067 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 SENP7Q9BQF6 1050 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 IRF2BPLQ9H1B7 796 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 RIOX1Q9H6W3 641 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 TLR9Q9NR96 1032 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 TUBE1Q9UJT0 475 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 FRMPD4Q14CM0 1322 aa18.69■□□□□ 0.58
USP48-210ENST00000489108 MARK3P27448 753 aa18.68■□□□□ 0.58
USP48-210ENST00000489108 TCF7P36402 384 aaPredicted RBP18.68■□□□□ 0.58
USP48-210ENST00000489108 GATMP50440 423 aa18.68■□□□□ 0.58
USP48-210ENST00000489108 IMMTQ16891 758 aaKnown RBP18.68■□□□□ 0.58
USP48-210ENST00000489108 CWC27Q6UX04 472 aaKnown RBP18.68■□□□□ 0.58
USP48-210ENST00000489108 SUSD6Q92537 303 aa18.68■□□□□ 0.58
USP48-210ENST00000489108 ZBTB10Q96DT7 871 aa18.68■□□□□ 0.58
USP48-210ENST00000489108 LOXHD1Q8IVV2 1947 aa18.68■□□□□ 0.58
USP48-210ENST00000489108 PLXNA3P51805 1871 aa18.67■□□□□ 0.58
USP48-210ENST00000489108 PNMA6FA0A0J9YX94 578 aa18.67■□□□□ 0.58
USP48-210ENST00000489108 MBLAC1A4D2B0 266 aaPredicted RBP18.67■□□□□ 0.58
USP48-210ENST00000489108 CYTH3O43739 400 aa18.67■□□□□ 0.58
USP48-210ENST00000489108 ATF7P17544 494 aaPredicted RBP18.67■□□□□ 0.58
USP48-210ENST00000489108 MRPS6P82932 125 aaKnown RBP18.67■□□□□ 0.58
USP48-210ENST00000489108 FOXK2Q01167 660 aa18.67■□□□□ 0.58
USP48-210ENST00000489108 CYB5R4Q7L1T6 521 aa18.67■□□□□ 0.58
USP48-210ENST00000489108 VN1R2Q8NFZ6 395 aa18.67■□□□□ 0.58
USP48-210ENST00000489108 ATP8B4Q8TF62 1192 aa18.67■□□□□ 0.58
USP48-210ENST00000489108 SPTBN4Q9H254 2564 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 GSTTP1A0A1W2PQM5 241 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 ATP9AO75110 1047 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 PDGFBP01127 241 aaPredicted RBP18.66■□□□□ 0.58
USP48-210ENST00000489108 STAG3L1P0CL83 205 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 IGBP1P78318 339 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 GRM4Q14833 912 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 PTPN21Q16825 1174 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 SEPT1Q8WYJ6 367 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 FTHL17Q9BXU8 183 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 FAM49AQ9H0Q0 323 aaPredicted RBP18.66■□□□□ 0.58
USP48-210ENST00000489108 CNNM2Q9H8M5 875 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 PADI3Q9ULW8 664 aa18.66■□□□□ 0.58
USP48-210ENST00000489108 IBSPP21815 317 aaPredicted RBP18.65■□□□□ 0.58
USP48-210ENST00000489108 TMEM62Q0P6H9 643 aa18.65■□□□□ 0.58
USP48-210ENST00000489108 IER5Q5VY09 327 aa18.65■□□□□ 0.58
USP48-210ENST00000489108 PCNX4Q63HM2 1172 aa18.65■□□□□ 0.58
USP48-210ENST00000489108 GIMAP8Q8ND71 665 aaPredicted RBP18.65■□□□□ 0.58
USP48-210ENST00000489108 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
USP48-210ENST00000489108 RIPOR3Q96MK2 946 aa18.65■□□□□ 0.58
USP48-210ENST00000489108 DSCC1Q9BVC3 393 aa18.65■□□□□ 0.58
USP48-210ENST00000489108 ERAP1Q9NZ08 941 aa18.65■□□□□ 0.58
USP48-210ENST00000489108 LRFN2Q9ULH4 789 aa18.65■□□□□ 0.58
USP48-210ENST00000489108 SQORQ9Y6N5 450 aa18.65■□□□□ 0.58
USP48-210ENST00000489108 MYO10Q9HD67 2058 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 PROB1E7EW31 1015 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 SCG2P13521 617 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 ERVFC1P60507 584 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 USP17L6PQ6QN14 398 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 ASCL5Q7RTU5 278 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 NLRX1Q86UT6 975 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 GLG1Q92896 1179 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 NEK1Q96PY6 1258 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 LNPKQ9C0E8 428 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 S1PR5Q9H228 398 aa18.64■□□□□ 0.57
USP48-210ENST00000489108 INSRRP14616 1297 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 KCNA2P16389 499 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 DUSP6Q16828 381 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 SPOUT1Q5T280 376 aaKnown RBP18.63■□□□□ 0.57
USP48-210ENST00000489108 XRRA1Q6P2D8 792 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 ZBTB33Q86T24 672 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 SMARCC2Q8TAQ2 1214 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 APOL5Q9BWW9 433 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 TMX1Q9H3N1 280 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 SMARCAD1Q9H4L7 1026 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 SENP2Q9HC62 589 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 DIAPH3Q9NSV4 1193 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 PCDHB12Q9Y5F1 795 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms