RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CYP3A7-CYP3A51PA0A087WV96 503 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 DHX15O43143 795 aaKnown RBP16.16■□□□□ 0.18
BRCA1-218ENST00000489037 MARCH6O60337 910 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 JAK2O60674 1132 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 GAS7O60861 476 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 DTNBO60941 627 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 CAND2O75155 1236 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 PSAPP07602 524 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 CYP3A7P24462 503 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 HOXC8P31273 242 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 HMGN5P82970 282 aaKnown RBP16.16■□□□□ 0.18
BRCA1-218ENST00000489037 SAFBQ15424 915 aaKnown RBP eCLIP16.16■□□□□ 0.18
BRCA1-218ENST00000489037 NPY5RQ15761 445 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 GRIK4Q16099 956 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 LETM2Q2VYF4 491 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 Q4G0T1 1027 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 PDXDC2PQ6P474 469 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 ABHD15Q6UXT9 468 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 PIK3AP1Q6ZUJ8 805 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 NEK8Q86SG6 692 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 CKAP2LQ8IYA6 745 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 FAM184AQ8NB25 1140 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 LMBR1Q8WVP7 490 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 RIT2Q99578 217 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 DDX25Q9UHL0 483 aaKnown RBP16.16■□□□□ 0.18
BRCA1-218ENST00000489037 PCDHA10Q9Y5I2 948 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 SLC4A7Q9Y6M7 1214 aa16.16■□□□□ 0.18
BRCA1-218ENST00000489037 POTEB3A0JP26 581 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 WDR64B1ANS9 1081 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 RSPH10B2B2RC85 870 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 MSH4O15457 936 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 TDP2O95551 362 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 CCNE2O96020 404 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 RPLP2P05387 115 aaKnown RBP16.15■□□□□ 0.18
BRCA1-218ENST00000489037 RSPH10BP0C881 870 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 GCFC2P16383 781 aaKnown RBP16.15■□□□□ 0.18
BRCA1-218ENST00000489037 FOSBP53539 338 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 IGBP1P78318 339 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 HIC1Q14526 733 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 TRIM71Q2Q1W2 868 aaKnown RBP16.15■□□□□ 0.18
BRCA1-218ENST00000489037 ZNF618Q5T7W0 954 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 ZNF697Q5TEC3 545 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 LRCH2Q5VUJ6 765 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 SWSAP1Q6NVH7 229 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 TAF2Q6P1X5 1199 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 POTEBQ6S5H4 581 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 EVPLQ92817 2033 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 PCYT2Q99447 389 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 TUBE1Q9UJT0 475 aa16.15■□□□□ 0.18
BRCA1-218ENST00000489037 IGKV6D-21A0A0A0MT36 114 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 HBP1O60381 514 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 MMP1P03956 469 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 INSRRP14616 1297 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 SFNP31947 248 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 JAK3P52333 1124 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 PLCB4Q15147 1175 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 RASIP1Q5U651 963 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 KRT40Q6A162 431 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 FAM109BQ6ICB4 259 aaPredicted RBP16.14■□□□□ 0.17
BRCA1-218ENST00000489037 DEFB123Q8N688 67 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 SLC5A5Q92911 643 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 LENG9Q96B70 501 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 C8orf76Q96K31 380 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 MSRAQ9UJ68 235 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
BRCA1-218ENST00000489037 CCNT1O60563 726 aaKnown RBP16.13■□□□□ 0.17
BRCA1-218ENST00000489037 BAIAP3O94812 1187 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 BAG4O95429 457 aaKnown RBP16.13■□□□□ 0.17
BRCA1-218ENST00000489037 KCNJ6P48051 423 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 MCM2P49736 904 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 ADAM17P78536 824 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 PPP4R3AQ6IN85 833 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 CNKSR3Q6P9H4 555 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 CCDC60Q8IWA6 550 aaPredicted RBP16.13■□□□□ 0.17
BRCA1-218ENST00000489037 DIS3L2Q8IYB7 885 aaKnown RBP16.13■□□□□ 0.17
BRCA1-218ENST00000489037 OXER1Q8TDS5 423 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 WNT8BQ93098 351 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 MBOAT7Q96N66 472 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 DISC1Q9NRI5 854 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 GABBR1Q9UBS5 961 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 KIF3AQ9Y496 699 aa16.13■□□□□ 0.17
BRCA1-218ENST00000489037 CHMP2AO43633 222 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 EDIL3O43854 480 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 EFCAB14O75071 495 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 CXCL10P02778 98 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 CTSHP09668 335 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 ST3GAL1Q11201 340 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 NR5A1Q13285 461 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
BRCA1-218ENST00000489037 IKBKEQ14164 716 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 RAB30Q15771 203 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 ZNF484Q5JVG2 852 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 MIER3Q7Z3K6 550 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 RDM1Q8NG50 284 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 ATP8B4Q8TF62 1192 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 FAM167AQ96KS9 214 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 FAM20AQ96MK3 541 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 TBC1D32Q96NH3 1257 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 CXXC1Q9P0U4 656 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms