RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 HSP90AB4PQ58FF6 505 aa9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 ZNF804AQ7Z570 1209 aa9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 LSRQ86X29 649 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 CKAP2LQ8IYA6 745 aa9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 UBXN4Q92575 508 aa9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 ARMC5Q96C12 935 aa9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 ATG4CQ96DT6 458 aa9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 SHDQ96IW2 340 aa9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 MIPEPQ99797 713 aa9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 ANTXR1Q9H6X2 564 aa9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 KIAA0100Q14667 2235 aaKnown RBP9.8□□□□□ -0.84
TRAPPC12-221ENST00000489032 HTTP42858 3142 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 COL6A3P12111 3177 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 YDJCA8MPS7 323 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 H0YGN5 161 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 GSC2O15499 205 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 DYNC1LI2O43237 492 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 ECE2O60344 883 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 IGHA1P01876 353 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 SLC5A1P13866 664 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 NME1P15531 152 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 RPS12P25398 132 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 SREBF2Q12772 1141 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 CAVIN4Q5BKX8 364 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 CDCP2Q5VXM1 449 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 ERC1Q8IUD2 1116 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 FBXL6Q8N531 539 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 DHX38Q92620 1227 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 SPOCK3Q9BQ16 436 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 COA1Q9GZY4 146 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 CNNM2Q9H8M5 875 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 DBNDD1Q9H9R9 158 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 GGA3Q9NZ52 723 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 SLC12A7Q9Y666 1083 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 CENPFP49454 3210 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 DUOX1Q9NRD9 1551 aa9.79□□□□□ -0.84
TRAPPC12-221ENST00000489032 PSMD14O00487 310 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 ITGB2P05107 769 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 H2AFB1P0C5Y9 115 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 H2AFB2P0C5Z0 115 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 GUCY2CP25092 1073 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 ETFBP38117 255 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 CYP27A1Q02318 531 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 ATP2B3Q16720 1220 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 CYP27C1Q4G0S4 372 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 ZNF746Q6NUN9 644 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 C15orf52Q6ZUT6 534 aaKnown RBP9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 OTOP1Q7RTM1 612 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 ATG9AQ7Z3C6 839 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 TOP6BLQ8N6T0 577 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 CYB5D2Q8WUJ1 264 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 LPIN2Q92539 896 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 C1GALT1Q9NS00 363 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 PITPNM2Q9BZ72 1349 aa9.78□□□□□ -0.84
TRAPPC12-221ENST00000489032 DNAJA2O60884 412 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 RAB11FIP3O75154 756 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 FRAT2O75474 233 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 CYP7A1P22680 504 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 HIBADHP31937 336 aaKnown RBP9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 TFCP2Q12800 502 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 GORABQ5T7V8 394 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 RNF43Q68DV7 783 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 LETMD1Q6P1Q0 360 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 SEZ6L2Q6UXD5 910 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 VGLL2Q8N8G2 317 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 MFSD14AQ96MC6 490 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 KIF2CQ99661 725 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 GNL3LQ9NVN8 582 aaKnown RBP9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 PRKAG3Q9UGI9 489 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 TPX2Q9ULW0 747 aaKnown RBP9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 NOP58Q9Y2X3 529 aaKnown RBP9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 CUL9Q8IWT3 2517 aa9.77□□□□□ -0.85
TRAPPC12-221ENST00000489032 SNAP23O00161 211 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 SMAD7O15105 426 aaKnown RBP9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 FAM87AP0C7U9 286 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 CCNFP41002 786 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 RUFY4Q6ZNE9 571 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 ZAR1Q86SH2 424 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 NEUROD6Q96NK8 337 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 TRIM55Q9BYV6 548 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 R3HDMLQ9H3Y0 253 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 CD209Q9NNX6 404 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 GPR108Q9NPR9 543 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 EXOC6BQ9Y2D4 811 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 PTPN22Q9Y2R2 807 aa9.76□□□□□ -0.85
TRAPPC12-221ENST00000489032 WTIPA6NIX2 430 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 UBE2Q2LH0YL09 131 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 RGS13O14921 159 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 FGFR2P21802 821 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 KLRK1P26718 216 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 ETV3P41162 512 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 GYG1P46976 350 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 NFIAQ12857 509 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 ANGEL2Q5VTE6 544 aaKnown RBP9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 OGFOD3Q6PK18 319 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 ANKS3Q6ZW76 656 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 MOB2Q70IA6 237 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 TAB3Q8N5C8 712 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 EXOC6Q8TAG9 804 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 KIF1BPQ96EK5 621 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms