RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 ATP9AO75110 1047 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 CAND2O75155 1236 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 GATMP50440 423 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 COL9A3Q14050 684 aaPredicted RBP13.18□□□□□ -0.3
USP11-210ENST00000489030 SMAD2Q15796 467 aaKnown RBP13.18□□□□□ -0.3
USP11-210ENST00000489030 IER5LQ5T953 404 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 USP17L6PQ6QN14 398 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 RUFY3Q7L099 469 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 DHX32Q7L7V1 743 aaKnown RBP13.18□□□□□ -0.3
USP11-210ENST00000489030 RTN4RL1Q86UN2 441 aaPredicted RBP13.18□□□□□ -0.3
USP11-210ENST00000489030 RNF135Q8IUD6 432 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 MTA3Q9BTC8 594 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 AGO3Q9H9G7 860 aaKnown RBP13.18□□□□□ -0.3
USP11-210ENST00000489030 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 MAP3K20Q9NYL2 800 aaKnown RBP13.18□□□□□ -0.3
USP11-210ENST00000489030 PRKAG3Q9UGI9 489 aa13.18□□□□□ -0.3
USP11-210ENST00000489030 ERICH2A1L162 156 aa13.17□□□□□ -0.3
USP11-210ENST00000489030 MARK3P27448 753 aa13.17□□□□□ -0.3
USP11-210ENST00000489030 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
USP11-210ENST00000489030 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
USP11-210ENST00000489030 MARCH8Q5T0T0 291 aa13.17□□□□□ -0.3
USP11-210ENST00000489030 PRSS33Q8NF86 280 aa13.17□□□□□ -0.3
USP11-210ENST00000489030 CLP1Q92989 425 aaKnown RBP13.17□□□□□ -0.3
USP11-210ENST00000489030 ZNF689Q96CS4 500 aaPredicted RBP13.17□□□□□ -0.3
USP11-210ENST00000489030 CLEC1BQ9P126 229 aa13.17□□□□□ -0.3
USP11-210ENST00000489030 MRPL42Q9Y6G3 142 aaKnown RBP13.17□□□□□ -0.3
USP11-210ENST00000489030 TTC3P53804 2025 aa13.17□□□□□ -0.3
USP11-210ENST00000489030 PNMA6FA0A0J9YX94 578 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 GSTTP1A0A1W2PQM5 241 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 FIBPO43427 364 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 ITGB1P05556 798 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 RPS6KB1P23443 525 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 ANTXR2P58335 489 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
USP11-210ENST00000489030 TROAPQ12815 778 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 ADAM15Q13444 863 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 NEDD9Q14511 834 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 RABEP1Q15276 862 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
USP11-210ENST00000489030 FBXO47Q5MNV8 452 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 MB21D2Q8IYB1 491 aaPredicted RBP13.16□□□□□ -0.3
USP11-210ENST00000489030 CRIPAKQ8N1N5 446 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 TMTC2Q8N394 836 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 SAMD3Q8N6K7 520 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 DNAJB3Q8WWF6 145 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 APBB2Q92870 758 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 TMEM87BQ96K49 555 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 KIF2CQ99661 725 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 C11orf84Q9BUA3 381 aaPredicted RBP13.16□□□□□ -0.3
USP11-210ENST00000489030 MYL10Q9BUA6 226 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 PKD2L1Q9P0L9 805 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 PLAGL2Q9UPG8 496 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 RALGAPA2Q2PPJ7 1873 aa13.16□□□□□ -0.3
USP11-210ENST00000489030 CACNA1HO95180 2353 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 STXBP3O00186 592 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 MEIS2O14770 477 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 PRC1O43663 620 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 DGKIO75912 1065 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 GLP2RO95838 553 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 MMP1P03956 469 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 KCNA2P16389 499 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 ITGB5P18084 799 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 CD52P31358 61 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 TCF7P36402 384 aaPredicted RBP13.15□□□□□ -0.3
USP11-210ENST00000489030 NEK4P51957 841 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 FGD1P98174 961 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 SMAD4Q13485 552 aaKnown RBP13.15□□□□□ -0.3
USP11-210ENST00000489030 BTG3Q14201 252 aaPredicted RBP13.15□□□□□ -0.3
USP11-210ENST00000489030 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 PCYT2Q99447 389 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 CD207Q9UJ71 328 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 CDY2AQ9Y6F7 541 aa13.15□□□□□ -0.3
USP11-210ENST00000489030 MBLAC1A4D2B0 266 aaPredicted RBP13.14□□□□□ -0.31
USP11-210ENST00000489030 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
USP11-210ENST00000489030 RB1P06400 928 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 GNAT1P11488 350 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 PPFIA1Q13136 1202 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 GRIK4Q16099 956 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 GNPTABQ3T906 1256 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 PAN2Q504Q3 1202 aaKnown RBP13.14□□□□□ -0.31
USP11-210ENST00000489030 PCNX4Q63HM2 1172 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 FBXL16Q8N461 479 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 SPPL3Q8TCT6 385 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 LMAN2LQ9H0V9 348 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
USP11-210ENST00000489030 ZNF215Q9UL58 517 aaPredicted RBP13.14□□□□□ -0.31
USP11-210ENST00000489030 BARX2Q9UMQ3 279 aaPredicted RBP13.14□□□□□ -0.31
USP11-210ENST00000489030 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 ST18O60284 1047 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 CPA1P15085 419 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 IGBP1P78318 339 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 TMEM62Q0P6H9 643 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 WTAPQ15007 396 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 ANKRD1Q15327 319 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 Q6ZUG5 572 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 RBM23Q86U06 439 aaKnown RBP13.13□□□□□ -0.31
USP11-210ENST00000489030 CMTR1Q8N1G2 835 aaKnown RBP13.13□□□□□ -0.31
USP11-210ENST00000489030 KLHL23Q8NBE8 558 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms