RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 U2AF1Q01081 240 aaKnown RBP eCLIP5.18□□□□□ -1.58
KDM3A-213ENST00000488971 KLF1Q13351 362 aaPredicted RBP5.18□□□□□ -1.58
KDM3A-213ENST00000488971 HDAC1Q13547 482 aaPredicted RBP5.18□□□□□ -1.58
KDM3A-213ENST00000488971 PTPN21Q16825 1174 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 ABCB5Q2M3G0 1257 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 GFOD2Q3B7J2 385 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 CNKSR3Q6P9H4 555 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 C16orf59Q7L2K0 433 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 OTOP1Q7RTM1 612 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 CHTF18Q8WVB6 975 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 JPH3Q8WXH2 748 aaPredicted RBP5.18□□□□□ -1.58
KDM3A-213ENST00000488971 DACT3Q96B18 629 aaPredicted RBP5.18□□□□□ -1.58
KDM3A-213ENST00000488971 FUBP3Q96I24 572 aaKnown RBP eCLIP5.18□□□□□ -1.58
KDM3A-213ENST00000488971 SCYL1Q96KG9 808 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 ZNF700Q9H0M5 742 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 THG1LQ9NWX6 298 aaKnown RBP5.18□□□□□ -1.58
KDM3A-213ENST00000488971 RTEL1Q9NZ71 1219 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 TAF6LQ9Y6J9 622 aa5.18□□□□□ -1.58
KDM3A-213ENST00000488971 PTPDC1A2A3K4 754 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 CCDC66A2RUB6 948 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 OTOL1A6NHN0 477 aaPredicted RBP5.17□□□□□ -1.58
KDM3A-213ENST00000488971 FAM47E-STBD1D6RA91 191 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 FZD9O00144 591 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 PRPF3O43395 683 aaKnown RBP5.17□□□□□ -1.58
KDM3A-213ENST00000488971 PAMP19021 973 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 ARL4AP40617 200 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 KPNA1P52294 538 aaPredicted RBP5.17□□□□□ -1.58
KDM3A-213ENST00000488971 ARHGAP44Q17R89 818 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 RTP2Q5QGT7 225 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 TMEM240Q5SV17 173 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 CREB3L3Q68CJ9 461 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 GALNT18Q6P9A2 607 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 DGKHQ86XP1 1220 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 ZDHHC14Q8IZN3 488 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 SAMD3Q8N6K7 520 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 EFHBQ8N7U6 833 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 CLRN3Q8NCR9 226 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 CXorf38Q8TB03 319 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 FEZF2Q8TBJ5 459 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 MZB1Q8WU39 189 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 FBXW5Q969U6 566 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 AHCYL2Q96HN2 611 aaKnown RBP5.17□□□□□ -1.58
KDM3A-213ENST00000488971 PLCD4Q9BRC7 762 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 XYLT2Q9H1B5 865 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 TNFRSF10DQ9UBN6 386 aa5.17□□□□□ -1.58
KDM3A-213ENST00000488971 NOB1Q9ULX3 412 aaKnown RBP5.17□□□□□ -1.58
KDM3A-213ENST00000488971 LUC7L2Q9Y383 392 aaKnown RBP5.17□□□□□ -1.58
KDM3A-213ENST00000488971 NPHP3-ACAD11A0A0J9YXS1 232 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 WTIPA6NIX2 430 aaPredicted RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 FGF10O15520 208 aaPredicted RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 ENDOUP21128 410 aaKnown RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 GRK2P25098 689 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 GRK3P35626 688 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 IARSP41252 1262 aaKnown RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 CDR1P51861 262 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 YBX1P67809 324 aaKnown RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 LACTBP83111 547 aaPredicted RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 TMEM62Q0P6H9 643 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 RAB3GAP1Q15042 981 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 INF2Q27J81 1249 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 MBLAC2Q68D91 279 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 DBX2Q6ZNG2 339 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 TMC6Q7Z403 805 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 HDGFL2Q7Z4V5 671 aaPredicted RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 PRRT2Q7Z6L0 340 aaPredicted RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 FBXO41Q8TF61 875 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 SLC5A5Q92911 643 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 FCRL2Q96LA5 508 aaPredicted RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 CDIP1Q9H305 208 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 IPPKQ9H8X2 491 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 VTA1Q9NP79 307 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 OXSMQ9NWU1 459 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 IP6K2Q9UHH9 426 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 PNMA8BQ9ULN7 279 aaPredicted RBP5.16□□□□□ -1.58
KDM3A-213ENST00000488971 JAG2Q9Y219 1238 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 PCDHA2Q9Y5H9 948 aa5.16□□□□□ -1.58
KDM3A-213ENST00000488971 SNUPNO95149 360 aaKnown RBP5.15□□□□□ -1.59
KDM3A-213ENST00000488971 CELA3BP08861 270 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 GSTM1P09488 218 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 MYBL2P10244 700 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 RBP3P10745 1247 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 RECQLP46063 649 aaPredicted RBP5.15□□□□□ -1.59
KDM3A-213ENST00000488971 DNM2P50570 870 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 ERVFRD-1P60508 538 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 PHC1P78364 1004 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 ST5P78524 1137 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 LAPTM5Q13571 262 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 KIR3DS1Q14943 382 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 DDB1Q16531 1140 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 HSF5Q4G112 596 aaPredicted RBP5.15□□□□□ -1.59
KDM3A-213ENST00000488971 SP8Q8IXZ3 490 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 CPA6Q8N4T0 437 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 C2orf69Q8N8R5 385 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 C1orf162Q8NEQ5 155 aaPredicted RBP5.15□□□□□ -1.59
KDM3A-213ENST00000488971 PTCHD1Q96NR3 888 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 CDADC1Q9BWV3 514 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 EPB41L4AQ9HCS5 686 aaPredicted RBP5.15□□□□□ -1.59
KDM3A-213ENST00000488971 KLHL14Q9P2G3 628 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 CBLCQ9ULV8 474 aa5.15□□□□□ -1.59
KDM3A-213ENST00000488971 ANKRD6Q9Y2G4 727 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms