RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 WDR26Q9H7D7 661 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 HSPBP1Q9NZL4 362 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 ASH2LQ9UBL3 628 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 ADAM29Q9UKF5 820 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 TCAF1Q9Y4C2 921 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 HS3ST3A1Q9Y663 406 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 TRBV23-1A0A0A0MS06 115 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 PPP1R12AO14974 1030 aaPredicted RBP4.77□□□□□ -1.65
CD46-215ENST00000488596 SLC27A2O14975 620 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 MUSKO15146 869 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 DLX3O60479 287 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 MSCO60682 206 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 CNOT4O95628 575 aaKnown RBP4.77□□□□□ -1.65
CD46-215ENST00000488596 SELENOPP49908 381 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 GRIN1Q05586 938 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 PIP4K2CQ8TBX8 421 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 PHOSPHO1Q8TCT1 267 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 GNRHR2Q96P88 292 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 WRNIP1Q96S55 665 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 DHRS4Q9BTZ2 278 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 TMEM260Q9NX78 707 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 PPARGC1AQ9UBK2 798 aaKnown RBP4.77□□□□□ -1.65
CD46-215ENST00000488596 TESMINQ9Y4I5 508 aa4.77□□□□□ -1.65
CD46-215ENST00000488596 ASMTLO95671 621 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 CKMP06732 381 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 FGFR1P11362 822 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 KLF10Q13118 480 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 LONRF2Q1L5Z9 754 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 ZNF662Q6ZS27 426 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 HOMER1Q86YM7 354 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 SCUBE1Q8IWY4 988 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 DTX3Q8N9I9 347 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 ZSWIM2Q8NEG5 633 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 APPBP2Q92624 585 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 IPO9Q96P70 1041 aaKnown RBP4.76□□□□□ -1.65
CD46-215ENST00000488596 SLC6A20Q9NP91 592 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 DLL4Q9NR61 685 aa4.76□□□□□ -1.65
CD46-215ENST00000488596 ING1Q9UK53 422 aaPredicted RBP4.76□□□□□ -1.65
CD46-215ENST00000488596 KRIT1O00522 736 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 FOXS1O43638 330 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 MAFKO60675 156 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 CDC45O75419 566 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 KNG1P01042 644 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 LTFP02788 710 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 SMAD2Q15796 467 aaKnown RBP4.75□□□□□ -1.65
CD46-215ENST00000488596 NTRK3Q16288 839 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 TKFCQ3LXA3 575 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 EGFLAMQ63HQ2 1017 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 VASNQ6EMK4 673 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 CYP4F22Q6NT55 531 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 Q6ZUG5 572 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 TRIM48Q8IWZ4 208 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 TTLL11Q8NHH1 800 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 KCTD13Q8WZ19 329 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 SEMA4AQ9H3S1 761 aa4.75□□□□□ -1.65
CD46-215ENST00000488596 MRPS23Q9Y3D9 190 aaKnown RBP4.75□□□□□ -1.65
CD46-215ENST00000488596 ENPP3O14638 875 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 RAPGEF3O95398 923 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 HSD3B2P26439 372 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 SKIDA1Q1XH10 827 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 TCTN3Q6NUS6 607 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 USP53Q70EK8 1073 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 GPR155Q7Z3F1 870 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 RALYLQ86SE5 291 aaKnown RBP4.74□□□□□ -1.65
CD46-215ENST00000488596 AJUBAQ96IF1 538 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 GPR27Q9NS67 375 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 CD2APQ9Y5K6 639 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 SLC4A7Q9Y6M7 1214 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 SBNO2Q9Y2G9 1366 aa4.74□□□□□ -1.65
CD46-215ENST00000488596 IL18BPO95998 194 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 COL6A2P12110 1019 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 FAHP16930 419 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 CSF2RBP32927 897 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 GLRBP48167 497 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 MAP4K2Q12851 820 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 TUSC3Q13454 348 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 PAN2Q504Q3 1202 aaKnown RBP4.73□□□□□ -1.65
CD46-215ENST00000488596 ZC3H12BQ5HYM0 836 aaKnown RBP4.73□□□□□ -1.65
CD46-215ENST00000488596 KCNT2Q6UVM3 1135 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 C16orf86Q6ZW13 317 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 OTOP3Q7RTS5 596 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 STPG3Q8N7X2 389 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 CLUHP3Q96NS8 147 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 SEC61A2Q9H9S3 476 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 KCND1Q9NSA2 647 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 ZFP69BQ9UJL9 534 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.73□□□□□ -1.65
CD46-215ENST00000488596 PTPN22Q9Y2R2 807 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 TRAF6Q9Y4K3 522 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 TELO2Q9Y4R8 837 aa4.73□□□□□ -1.65
CD46-215ENST00000488596 ASXL2Q76L83 1435 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 CCDC163A0A0D9SF12 145 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 NPIPB8E9PQR5 432 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 FBXO21O94952 628 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 CHGBP05060 677 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 C6orf222P0C671 652 aaPredicted RBP4.72□□□□□ -1.65
CD46-215ENST00000488596 GYS2P54840 703 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 SUMO1P63165 101 aaKnown RBP4.72□□□□□ -1.65
CD46-215ENST00000488596 PFKPQ01813 784 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 PLEKHG4Q58EX7 1191 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms