RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 ARHGAP4P98171 946 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 CUL4AQ13619 759 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
LCN2-206ENST00000488391 TRIM67Q6ZTA4 783 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 BMP8AQ7Z5Y6 402 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 ENAHQ8N8S7 591 aaPredicted RBP12.57□□□□□ -0.4
LCN2-206ENST00000488391 INTS4Q96HW7 963 aaKnown RBP12.57□□□□□ -0.4
LCN2-206ENST00000488391 TMX3Q96JJ7 454 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 ZSCAN10Q96SZ4 725 aaPredicted RBP12.57□□□□□ -0.4
LCN2-206ENST00000488391 KRT23Q9C075 422 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 SH2B1Q9NRF2 756 aaPredicted RBP12.57□□□□□ -0.4
LCN2-206ENST00000488391 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
LCN2-206ENST00000488391 BAZ2BQ9UIF8 2168 aaKnown RBP12.57□□□□□ -0.4
LCN2-206ENST00000488391 KLRF2D3W0D1 207 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 HSP90AA1P07900 732 aaKnown RBP12.56□□□□□ -0.4
LCN2-206ENST00000488391 GHRP10912 638 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 CPA1P15085 419 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 NDUFV1P49821 464 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 PTPN5P54829 565 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 GHRHRQ02643 423 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 CAMK1Q14012 370 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 BTG3Q14201 252 aaPredicted RBP12.56□□□□□ -0.4
LCN2-206ENST00000488391 FAM26DQ5JW98 314 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 CYFIP1Q7L576 1253 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 TRIM50Q86XT4 487 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 CLP1Q92989 425 aaKnown RBP12.56□□□□□ -0.4
LCN2-206ENST00000488391 MAP3K20Q9NYL2 800 aaKnown RBP12.56□□□□□ -0.4
LCN2-206ENST00000488391 RTEL1Q9NZ71 1219 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 PLAGL2Q9UPG8 496 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 RWDD3Q9Y3V2 267 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 TELO2Q9Y4R8 837 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 PTPRZ1P23471 2315 aaPredicted RBP12.56□□□□□ -0.4
LCN2-206ENST00000488391 ADGRA3Q8IWK6 1321 aa12.56□□□□□ -0.4
LCN2-206ENST00000488391 ZFHX2Q9C0A1 2572 aaPredicted RBP12.56□□□□□ -0.4
LCN2-206ENST00000488391 GCOM1H8Y6P7 765 aaPredicted RBP12.55□□□□□ -0.4
LCN2-206ENST00000488391 POLR2MP0CAP2 368 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 DNAJB1P25685 340 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 ADAM17P78536 824 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 ZXDAP98168 799 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 SP4Q02446 784 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 TCF15Q12870 199 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 TOB2Q14106 344 aaPredicted RBP12.55□□□□□ -0.4
LCN2-206ENST00000488391 RUFY4Q6ZNE9 571 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 ADGRD2Q7Z7M1 963 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 SUGP1Q8IWZ8 645 aaKnown RBP12.55□□□□□ -0.4
LCN2-206ENST00000488391 LMBR1Q8WVP7 490 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 MSLNLQ96KJ4 702 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 GPR20Q99678 358 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 FAM86C1Q9NVL1 165 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 CLEC1BQ9P126 229 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
LCN2-206ENST00000488391 DOCK5Q9H7D0 1870 aa12.55□□□□□ -0.4
LCN2-206ENST00000488391 COL4A6Q14031 1691 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 TTC3P53804 2025 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 ZBTB5O15062 677 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 EYA4O95677 639 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 MMP1P03956 469 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 EVCP57679 992 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 MRPS9P82933 396 aaKnown RBP12.54□□□□□ -0.4
LCN2-206ENST00000488391 NEDD9Q14511 834 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 LPIN1Q14693 890 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 Q6ZUG5 572 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
LCN2-206ENST00000488391 HOMER1Q86YM7 354 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 SAMD3Q8N6K7 520 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 ZNF689Q96CS4 500 aaPredicted RBP12.54□□□□□ -0.4
LCN2-206ENST00000488391 MTMR8Q96EF0 704 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 TMEM87BQ96K49 555 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 EHMT1Q9H9B1 1298 aa12.54□□□□□ -0.4
LCN2-206ENST00000488391 RC3H2Q9HBD1 1191 aaKnown RBP12.54□□□□□ -0.4
LCN2-206ENST00000488391 SPATA31C2B4DYI2 1134 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 LOC730098B7Z3J9 87 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 PRC1O43663 620 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 DGKIO75912 1065 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 ITGB1P05556 798 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 DDIT3P35638 169 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 NRIP1P48552 1158 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 FGD1P98174 961 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 PKN1Q16512 942 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 METTL7BQ6UX53 244 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 SPPL3Q8TCT6 385 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 PPP2R3CQ969Q6 453 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 RPGRIP1Q96KN7 1286 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 PIGSQ96S52 555 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 PRRX2Q99811 253 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 UBAC1Q9BSL1 405 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 PLVAPQ9BX97 442 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 MAD2L2Q9UI95 211 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
LCN2-206ENST00000488391 MRPL42Q9Y6G3 142 aaKnown RBP12.53□□□□□ -0.4
LCN2-206ENST00000488391 CACNA1HO95180 2353 aa12.53□□□□□ -0.4
LCN2-206ENST00000488391 CFAP54Q96N23 3096 aa12.52□□□□□ -0.4
LCN2-206ENST00000488391 GFRA3O60609 400 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 PPFIA3O75145 1194 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 ICAM3P32942 547 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 ANTXR2P58335 489 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 MGAT3Q09327 533 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms