RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TUT1Q9H6E5 874 aaKnown RBP12.45□□□□□ -0.42
UBE4B-210ENST00000488228 AZI2Q9H6S1 392 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 TTC12Q9H892 705 aaPredicted RBP12.45□□□□□ -0.42
UBE4B-210ENST00000488228 ZNF302Q9NR11 478 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 TRMT13Q9NUP7 481 aaKnown RBP12.45□□□□□ -0.42
UBE4B-210ENST00000488228 GABBR1Q9UBS5 961 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 IGKV6D-21A0A0A0MT36 114 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 SFNP31947 248 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 CDK7P50613 346 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 STAT5BP51692 787 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 HIC1Q14526 733 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 FOXD4L6Q3SYB3 417 aaPredicted RBP12.44□□□□□ -0.42
UBE4B-210ENST00000488228 C1orf53Q5VUE5 145 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 FAM160B1Q5W0V3 765 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 SWSAP1Q6NVH7 229 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 NFRKBQ6P4R8 1299 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 FOXD4L3Q6VB84 417 aaPredicted RBP12.44□□□□□ -0.42
UBE4B-210ENST00000488228 TRMT1LQ7Z2T5 733 aaKnown RBP12.44□□□□□ -0.42
UBE4B-210ENST00000488228 C7orf31Q8N865 590 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 BANK1Q8NDB2 785 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 DPF3Q92784 378 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 TRPV6Q9H1D0 765 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 RNPEPQ9H4A4 650 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 SMARCAD1Q9H4L7 1026 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 PRDM5Q9NQX1 630 aaPredicted RBP12.44□□□□□ -0.42
UBE4B-210ENST00000488228 PDLIM7Q9NR12 457 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 ERAP1Q9NZ08 941 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 HDAC6Q9UBN7 1215 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 TRPC6Q9Y210 931 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 ZDHHC9Q9Y397 364 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 PCDHA10Q9Y5I2 948 aa12.44□□□□□ -0.42
UBE4B-210ENST00000488228 MROH7Q68CQ1 1323 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 ZNF862O60290 1169 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 EVI5O60447 810 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 B4GALT4O60513 344 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 ZNF200P98182 395 aaPredicted RBP12.43□□□□□ -0.42
UBE4B-210ENST00000488228 ATP2C1P98194 919 aaPredicted RBP12.43□□□□□ -0.42
UBE4B-210ENST00000488228 PRKCEQ02156 737 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 CYP4A11Q02928 519 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 MLLT1Q03111 559 aaPredicted RBP12.43□□□□□ -0.42
UBE4B-210ENST00000488228 CEBPZQ03701 1054 aaKnown RBP12.43□□□□□ -0.42
UBE4B-210ENST00000488228 PPFIA1Q13136 1202 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 PLCB4Q15147 1175 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 SF3A1Q15459 793 aaKnown RBP12.43□□□□□ -0.42
UBE4B-210ENST00000488228 GDF6Q6KF10 455 aaPredicted RBP12.43□□□□□ -0.42
UBE4B-210ENST00000488228 PDXDC2PQ6P474 469 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 ANKRD33Q7Z3H0 272 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 RDM1Q8NG50 284 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 LMBR1Q8WVP7 490 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 TRAPPC12Q8WVT3 735 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 USP28Q96RU2 1077 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 ZSCAN16Q9H4T2 348 aaPredicted RBP12.43□□□□□ -0.42
UBE4B-210ENST00000488228 GTF2IRD1Q9UHL9 959 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 ZMYND8Q9ULU4 1186 aaPredicted RBP12.43□□□□□ -0.42
UBE4B-210ENST00000488228 PCDHA12Q9UN75 941 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 CLIC4Q9Y696 253 aa12.43□□□□□ -0.42
UBE4B-210ENST00000488228 TMEM150BA6NC51 233 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 PP2D1A8MPX8 630 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 BRD1O95696 1058 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 CLTBP09497 229 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 SYN1P17600 705 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 ATP4AP20648 1035 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 DDIT3P35638 169 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 TECP42680 631 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 IGBP1P78318 339 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 IL17AQ16552 155 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 TMEM266Q2M3C6 531 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 PLPPR4Q7Z2D5 763 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 SH3RF1Q7Z6J0 888 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 SESTD1Q86VW0 696 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 CKAP2LQ8IYA6 745 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 ATP8B4Q8TF62 1192 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 ZBTB10Q96DT7 871 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 CHAMP1Q96JM3 812 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 CTAGE1Q96RT6 745 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 LXNQ9BS40 222 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 SETD4Q9NVD3 440 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 RGL1Q9NZL6 768 aa12.42□□□□□ -0.42
UBE4B-210ENST00000488228 WRAP73Q9P2S5 460 aaPredicted RBP12.42□□□□□ -0.42
UBE4B-210ENST00000488228 DAXXQ9UER7 740 aaPredicted RBP12.42□□□□□ -0.42
UBE4B-210ENST00000488228 MAFBQ9Y5Q3 323 aaPredicted RBP12.42□□□□□ -0.42
UBE4B-210ENST00000488228 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 C17orf102A2RUQ5 167 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 VWA3AA6NCI4 1184 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 DCDC2CA8MYV0 355 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 RBAK-RBAKDNI3L0D1 243 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 LAD1O00515 517 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 CD4P01730 458 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 OATP04181 439 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 CYP2C9P11712 490 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 HOXC8P31273 242 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.422e-6■□□□□ 8.4
UBE4B-210ENST00000488228 PTPN11Q06124 597 aaPredicted RBP12.41□□□□□ -0.42
UBE4B-210ENST00000488228 FAAP100Q0VG06 881 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 CTTNQ14247 550 aaKnown RBP12.41□□□□□ -0.42
UBE4B-210ENST00000488228 PTPAQ15257 358 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 EPHA7Q15375 998 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 GRIK4Q16099 956 aa12.41□□□□□ -0.42
UBE4B-210ENST00000488228 PTGISQ16647 500 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms