RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 NFKB2Q00653 900 aa5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 DSG1Q02413 1049 aa5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 CR1LQ2VPA4 569 aa5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 VASNQ6EMK4 673 aa5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 TMC5Q6UXY8 1006 aa5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 C11orf74Q86VG3 221 aa5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 CHTF18Q8WVB6 975 aa5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 CNOT6Q9ULM6 557 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 B3GALT1Q9Y5Z6 326 aa5.41□□□□□ -1.54
ECHDC1-217ENST00000488087 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 FOXP2O15409 715 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 C1QTNF9P0C862 333 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 ZBTB48P10074 688 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 SLC9A1P19634 815 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 IGFBP6P24592 240 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 OCRLQ01968 901 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 DHCR24Q15392 516 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 SEC23AQ15436 765 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 CD276Q5ZPR3 534 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 STK32CQ86UX6 486 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 POU5F2Q8N7G0 328 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 KIAA1958Q8N8K9 716 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 SMC1BQ8NDV3 1235 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 ZCRB1Q8TBF4 217 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 TTC1Q99614 292 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 SYT3Q9BQG1 590 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 PDGFDQ9GZP0 370 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 PCDH18Q9HCL0 1135 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 OXSMQ9NWU1 459 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 H2AFY2Q9P0M6 372 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 ARHGAP28Q9P2N2 729 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 RBPJLQ9UBG7 517 aa5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 SMG5Q9UPR3 1016 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-217ENST00000488087 RFXAPO00287 272 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 FKBP9O95302 570 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 TSPAN15O95858 294 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 C4BPAP04003 597 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 MMEP08473 750 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 MED14OSP0DP75 135 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 PI3P19957 117 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 IBSPP21815 317 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 ADCYAP1R1P41586 468 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 RAP1GAPP47736 663 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 SSPNQ14714 243 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 PTPROQ16827 1216 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 CC2D1AQ6P1N0 951 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 CNKSR3Q6P9H4 555 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 FKBP9P1Q75LS8 142 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 STRA8Q7Z7C7 330 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 PASD1Q8IV76 773 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 HIPK4Q8NE63 616 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 ATL2Q8NHH9 583 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 DLG3Q92796 817 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 ERCC4Q92889 916 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 ZBTB8AQ96BR9 441 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 GBP4Q96PP9 640 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 IFT22Q9H7X7 185 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 ACSS2Q9NR19 701 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 TOMM22Q9NS69 142 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 COL4A3BPQ9Y5P4 624 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 PMF1-BGLAPU3KQ54 211 aa5.39□□□□□ -1.55
ECHDC1-217ENST00000488087 NEMP1O14524 444 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 ENO2P09104 434 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 LSSP48449 732 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 HERVK_113P62684 666 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 DBPQ10586 325 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 SMAD4Q13485 552 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 LIPIQ6XZB0 460 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 FAM129CQ86XR2 697 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 AFAP1L2Q8N4X5 818 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 BHLHE22Q8NFJ8 381 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 ZSWIM3Q96MP5 696 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 PWWP2AQ96N64 755 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 CLIC6Q96NY7 704 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 NOX5Q96PH1 765 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 TMEM209Q96SK2 561 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 GORASP1Q9BQQ3 440 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 SLC39A2Q9NP94 309 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 SPTLC3Q9NUV7 552 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 MCM8Q9UJA3 840 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 KCTD3Q9Y597 815 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 SPO11Q9Y5K1 396 aa5.38□□□□□ -1.55
ECHDC1-217ENST00000488087 ZNF839A8K0R7 811 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 NPIPB6E9PJ23 425 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 DVL2O14641 736 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 ZEB2O60315 1214 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 BRINP1O60477 761 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 CYP17A1P05093 508 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 PTX3P26022 381 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 AOAHP28039 575 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 SDHAP31040 664 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 ITGA1P56199 1179 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 LINC00310P59036 64 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 PFKPQ01813 784 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 ZNF124Q15973 351 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 KCNA10Q16322 511 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 ATP13A4Q4VNC1 1196 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 ZNF385BQ569K4 471 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 CATSPEREQ5SY80 951 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms