RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PTPN1P18031 435 aaKnown RBP6.79□□□□□ -1.32
SMC4-219ENST00000487747 DBPQ10586 325 aaPredicted RBP6.79□□□□□ -1.32
SMC4-219ENST00000487747 PAK1Q13153 545 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 BTBD8Q5XKL5 378 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 ARHGAP36Q6ZRI8 547 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 ZNF669Q96BR6 464 aaPredicted RBP6.79□□□□□ -1.32
SMC4-219ENST00000487747 LRRC37BQ96QE4 947 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 CBLCQ9ULV8 474 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 SRPK3Q9UPE1 567 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 NUB1Q9Y5A7 615 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 SLC4A7Q9Y6M7 1214 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 H0Y858 1186 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 KCNK3O14649 394 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 FAM153BP0C7A2 387 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 PYGMP11217 842 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 PDE6AP16499 860 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 SPDYAQ5MJ70 313 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 TCTN3Q6NUS6 607 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 MTDHQ86UE4 582 aaKnown RBP6.78□□□□□ -1.32
SMC4-219ENST00000487747 PTRH1Q86Y79 214 aaKnown RBP6.78□□□□□ -1.32
SMC4-219ENST00000487747 SCUBE1Q8IWY4 988 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 EXOC2Q96KP1 924 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 LMF1Q96S06 567 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 RIC8BQ9NVN3 520 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 PCDHA9Q9Y5H5 950 aa6.78□□□□□ -1.32
SMC4-219ENST00000487747 TRBV23-1A0A0A0MS06 115 aa6.77□□□□□ -1.33
SMC4-219ENST00000487747 ESYT3A0FGR9 886 aa6.77□□□□□ -1.33
SMC4-219ENST00000487747 SRGAP2CP0DJJ0 459 aa6.77□□□□□ -1.33
SMC4-219ENST00000487747 SSRP1Q08945 709 aaKnown RBP6.77□□□□□ -1.33
SMC4-219ENST00000487747 NOLC1Q14978 699 aaKnown RBP eCLIP6.77□□□□□ -1.334e-16■■■■■ 30.2
SMC4-219ENST00000487747 CKAP2LQ8IYA6 745 aa6.77□□□□□ -1.33
SMC4-219ENST00000487747 ZBTB38Q8NAP3 1195 aaPredicted RBP6.77□□□□□ -1.33
SMC4-219ENST00000487747 PTPRN2Q92932 1015 aa6.77□□□□□ -1.33
SMC4-219ENST00000487747 ZNF747Q9BV97 191 aa6.77□□□□□ -1.33
SMC4-219ENST00000487747 CATSPERZQ9NTU4 200 aa6.77□□□□□ -1.33
SMC4-219ENST00000487747 WNT9AO14904 365 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 AMHP03971 560 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 KRT15P19012 456 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 TACR2P21452 398 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 JAM2P57087 298 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 GUCY1A3Q02108 690 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 RASGRF1Q13972 1273 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 SEC23AQ15436 765 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 GPR19Q15760 415 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 MTERF2Q49AM1 385 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 NAALADL2Q58DX5 795 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 CRIP3Q6Q6R5 217 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 MAMDC2Q7Z304 686 aaPredicted RBP6.76□□□□□ -1.33
SMC4-219ENST00000487747 CDC6Q99741 560 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 SEC61A2Q9H9S3 476 aa6.76□□□□□ -1.33
SMC4-219ENST00000487747 ARVCFO00192 962 aa6.75□□□□□ -1.33
SMC4-219ENST00000487747 AQP7O14520 342 aa6.75□□□□□ -1.33
SMC4-219ENST00000487747 SELENOPP49908 381 aa6.75□□□□□ -1.33
SMC4-219ENST00000487747 TOP3AQ13472 1001 aaPredicted RBP6.75□□□□□ -1.33
SMC4-219ENST00000487747 USP10Q14694 798 aaKnown RBP6.75□□□□□ -1.33
SMC4-219ENST00000487747 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
SMC4-219ENST00000487747 FBXW5Q969U6 566 aa6.75□□□□□ -1.33
SMC4-219ENST00000487747 NEIL1Q96FI4 390 aaPredicted RBP6.75□□□□□ -1.33
SMC4-219ENST00000487747 CDK5RAP1Q96SZ6 601 aaKnown RBP6.75□□□□□ -1.33
SMC4-219ENST00000487747 MUSKO15146 869 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 SLPIP03973 132 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 POLD1P28340 1107 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 MC4RP32245 332 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 RRADP55042 308 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 SUMO1P63165 101 aaKnown RBP6.74□□□□□ -1.33
SMC4-219ENST00000487747 FSTL4Q6MZW2 842 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 C16orf59Q7L2K0 433 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 DPH6Q7L8W6 267 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 TAX1BP1Q86VP1 789 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 REXO1L1PQ8IX06 675 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 ZFPM1Q8IX07 1006 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 NLGN4XQ8N0W4 816 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 CCDC113Q9H0I3 377 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 SMURF1Q9HCE7 757 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 TCAF1Q9Y4C2 921 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 ATP23Q9Y6H3 246 aa6.74□□□□□ -1.33
SMC4-219ENST00000487747 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 U2SURPO15042 1029 aaKnown RBP6.73□□□□□ -1.33
SMC4-219ENST00000487747 CRTAMO95727 393 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 C4BPAP04003 597 aaKnown RBP6.73□□□□□ -1.33
SMC4-219ENST00000487747 ZC3H6P61129 1189 aaKnown RBP6.73□□□□□ -1.33
SMC4-219ENST00000487747 IL13RA1P78552 427 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 TBR1Q16650 682 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 TM4SF20Q53R12 229 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 GIMAP8Q8ND71 665 aaPredicted RBP6.73□□□□□ -1.33
SMC4-219ENST00000487747 SORCS2Q96PQ0 1159 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 CARD11Q9BXL7 1154 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 VPS11Q9H270 941 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 BTBD7Q9P203 1132 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 ARHGAP28Q9P2N2 729 aa6.73□□□□□ -1.33
SMC4-219ENST00000487747 PPP1R1BQ9UD71 204 aaPredicted RBP6.73□□□□□ -1.33
SMC4-219ENST00000487747 ZFR2Q9UPR6 939 aaKnown RBP6.73□□□□□ -1.33
SMC4-219ENST00000487747 CCDC66A2RUB6 948 aa6.72□□□□□ -1.33
SMC4-219ENST00000487747 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
SMC4-219ENST00000487747 MATN2O00339 956 aa6.72□□□□□ -1.33
SMC4-219ENST00000487747 ACVRL1P37023 503 aa6.72□□□□□ -1.33
SMC4-219ENST00000487747 ADCY8P40145 1251 aa6.72□□□□□ -1.33
SMC4-219ENST00000487747 DNM2P50570 870 aa6.72□□□□□ -1.33
SMC4-219ENST00000487747 LRSAM1Q6UWE0 723 aa6.72□□□□□ -1.33
SMC4-219ENST00000487747 LARP4Q71RC2 724 aaKnown RBP eCLIP6.72□□□□□ -1.331e-17■■■■□ 24.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms