RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CENPPQ6IPU0 288 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 ZNF746Q6NUN9 644 aaPredicted RBP10.5□□□□□ -0.73
SF3B1-211ENST00000487698 RINT1Q6NUQ1 792 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 FOXR2Q6PJQ5 311 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 C1orf186Q6ZWK4 172 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 ANKRD23Q86SG2 305 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 IRF2BP1Q8IU81 584 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 BANK1Q8NDB2 785 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 GLIS3Q8NEA6 775 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 RDM1Q8NG50 284 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 PIGOQ8TEQ8 1089 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 FGD4Q96M96 766 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 KCNF1Q9H3M0 494 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 IMPACTQ9P2X3 320 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 DNAJC25-GNG10A0A024R161 153 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 LRRC10BA6NIK2 292 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 WDR64B1ANS9 1081 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 POTEB2H3BUK9 544 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 PDHXO00330 501 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 ZBTB39O15060 712 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 EIF3JO75822 258 aaKnown RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 CDK11BP21127 795 aaKnown RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 CACNB1Q02641 598 aaPredicted RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 FSTL1Q12841 308 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 GNPTABQ3T906 1256 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 CHADLQ6NUI6 762 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 CCDC186Q7Z3E2 898 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 VSTM4Q8IW00 320 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 FGFBP2Q9BYJ0 223 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 SEMA6BQ9H3T3 888 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 MROH8Q9H579 483 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 THAP9Q9H5L6 903 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 ZSWIM4Q9H7M6 989 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 KCND2Q9NZV8 630 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 LIMA1Q9UHB6 759 aaKnown RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 KRT18P05783 430 aaKnown RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 QARSP47897 775 aaKnown RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 SPAG1Q07617 926 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 RAD51AP2Q09MP3 1159 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 NR1I3Q14994 352 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 UGCGQ16739 394 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 TPD52L1Q16890 204 aaPredicted RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 ANKRD40Q6AI12 368 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
SF3B1-211ENST00000487698 DBR1Q9UK59 544 aaKnown RBP10.49□□□□□ -0.73
SF3B1-211ENST00000487698 ZNF236Q9UL36 1845 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 KCNJ18B7U540 433 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
SF3B1-211ENST00000487698 KCNJ12Q14500 433 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 KRT31Q15323 416 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 ZCWPW2Q504Y3 356 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 HERC4Q5GLZ8 1057 aaPredicted RBP10.48□□□□□ -0.73
SF3B1-211ENST00000487698 TCP11X2Q5H9J9 407 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 TMC6Q7Z403 805 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 SMAP1Q8IYB5 467 aaPredicted RBP10.48□□□□□ -0.73
SF3B1-211ENST00000487698 MYOCDQ8IZQ8 938 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 ZNF830Q96NB3 372 aaPredicted RBP10.48□□□□□ -0.73
SF3B1-211ENST00000487698 CTAGE1Q96RT6 745 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 PORCNQ9H237 461 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 MORF4L1Q9UBU8 362 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 RSPH10B2B2RC85 870 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 RSPH10BP0C881 870 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 GAP43P17677 238 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 GUCY2CP25092 1073 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 EEF1GP26641 437 aaKnown RBP10.48□□□□□ -0.73
SF3B1-211ENST00000487698 ZNF131P52739 623 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 PSMC5P62195 406 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 LRRC63Q05C16 580 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 KCTD2Q14681 263 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 LRRC41Q15345 812 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 EPM2AIP1Q7L775 607 aaPredicted RBP10.48□□□□□ -0.73
SF3B1-211ENST00000487698 SFR1Q86XK3 245 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 C4orf19Q8IY42 314 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 FAM43AQ8N2R8 423 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 CSGALNACT2Q8N6G5 542 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 SMCR8Q8TEV9 937 aaPredicted RBP10.48□□□□□ -0.73
SF3B1-211ENST00000487698 ZNF526Q8TF50 670 aaPredicted RBP10.48□□□□□ -0.73
SF3B1-211ENST00000487698 MMP19Q99542 508 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 BCAS3Q9H6U6 928 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 JPH1Q9HDC5 661 aaPredicted RBP10.48□□□□□ -0.73
SF3B1-211ENST00000487698 OLFML3Q9NRN5 406 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 TCEAL9Q9UHQ7 104 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 SAMM50Q9Y512 469 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 PCDHA10Q9Y5I2 948 aa10.48□□□□□ -0.73
SF3B1-211ENST00000487698 TBCAO75347 108 aaKnown RBP10.47□□□□□ -0.73
SF3B1-211ENST00000487698 PGK2P07205 417 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 PBX1P40424 430 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 GCLCP48506 637 aaPredicted RBP10.47□□□□□ -0.73
SF3B1-211ENST00000487698 GSDMDP57764 484 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 SP2Q02086 613 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 FILIP1Q7Z7B0 1213 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 GPRC5AQ8NFJ5 357 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 MORC4Q8TE76 937 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 CACTINQ8WUQ7 758 aaKnown RBP10.47□□□□□ -0.73
SF3B1-211ENST00000487698 SCFD1Q8WVM8 642 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 PTPN18Q99952 460 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 SRRTQ9BXP5 876 aaKnown RBP10.47□□□□□ -0.73
SF3B1-211ENST00000487698 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms