RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TBC1D10BQ4KMP7 808 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-214ENST00000487615 DPH6Q7L8W6 267 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 CEP170P1Q96L14 293 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 NT5C1BQ96P26 610 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 L2HGDHQ9H9P8 463 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 PODXL2Q9NZ53 605 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 SEL1LQ9UBV2 794 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 A0A087X0B3 334 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 SLC37A4O43826 429 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 SORBS3O60504 671 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 HEXIM1O94992 359 aaKnown RBP12.87□□□□□ -0.35
TRA2B-214ENST00000487615 MXI1P50539 228 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 DALRD3Q5D0E6 543 aaKnown RBP12.87□□□□□ -0.35
TRA2B-214ENST00000487615 ZNF365Q70YC5 407 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 PTF1AQ7RTS3 328 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 KMT5AQ9NQR1 393 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 A0A1W2PRG0 241 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 MFAP3P55082 362 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 GFPT1Q06210 699 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-214ENST00000487615 NSRP1Q9H0G5 558 aaKnown RBP12.87□□□□□ -0.35
TRA2B-214ENST00000487615 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 ASIC3Q9UHC3 531 aa12.87□□□□□ -0.35
TRA2B-214ENST00000487615 SEPT9Q9UHD8 586 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-214ENST00000487615 IPO5O00410 1097 aaKnown RBP12.86□□□□□ -0.35
TRA2B-214ENST00000487615 SLC26A4O43511 780 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 EYA4O95677 639 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 ZSCAN26Q16670 478 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 CEP55Q53EZ4 464 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 PRPF38AQ8NAV1 312 aaKnown RBP12.86□□□□□ -0.35
TRA2B-214ENST00000487615 SPEF2Q9C093 1822 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 LRRIQ4A6NIV6 560 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 PGRMC1O00264 195 aaKnown RBP12.86□□□□□ -0.35
TRA2B-214ENST00000487615 MDM2Q00987 491 aaPredicted RBP12.86□□□□□ -0.35
TRA2B-214ENST00000487615 DMTNQ08495 405 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 MTMR1Q13613 665 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 STYK1Q6J9G0 422 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
TRA2B-214ENST00000487615 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 ZDHHC15Q96MV8 337 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 PAGR1Q9BTK6 254 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 MLXIPQ9HAP2 919 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 PRR12Q9ULL5 1215 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 KIF4AO95239 1232 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 PDXDC1Q6P996 788 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 RNF207Q6ZRF8 634 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 GOLGA8KD6RF30 607 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 CYTH3O43739 400 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 GRB10Q13322 594 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 C15orf52Q6ZUT6 534 aaKnown RBP12.86□□□□□ -0.35
TRA2B-214ENST00000487615 BANK1Q8NDB2 785 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 EPB41L5Q9HCM4 733 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 RGL1Q9NZL6 768 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 HDAC6Q9UBN7 1215 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 IKBKGQ9Y6K9 419 aa12.86□□□□□ -0.35
TRA2B-214ENST00000487615 ARFGEF2Q9Y6D5 1785 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 CCND2P30279 289 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 HOXA10P31260 410 aaPredicted RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 KRT71Q3SY84 523 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 DCUN1D2Q6PH85 259 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 LDHDQ86WU2 507 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 PBKQ96KB5 322 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 MORC2Q9Y6X9 1032 aaPredicted RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 PDXKO00764 312 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 NAA35Q5VZE5 725 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 TTI2Q6NXR4 508 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 INTS8Q75QN2 995 aaKnown RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 CROCCP2Q86T23 111 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 COL23A1Q86Y22 540 aaPredicted RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 OTUD6BQ8N6M0 293 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 MAIP1Q8WWC4 291 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 PRM3Q9NNZ6 103 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 UBE2TQ9NPD8 197 aaPredicted RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 MKRN1Q9UHC7 482 aaKnown RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 NPHP3-ACAD11A0A0J9YXS1 232 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 POLRMTO00411 1230 aaKnown RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 FGRP09769 529 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 CEP85LQ5SZL2 805 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 ADAT2Q7Z6V5 191 aaKnown RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 SLC7A3Q8WY07 619 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 ERGIC2Q96RQ1 377 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 EHD4Q9H223 541 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 RAVER2Q9HCJ3 691 aaKnown RBP12.85□□□□□ -0.35
TRA2B-214ENST00000487615 TBC1D22BQ9NU19 505 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 USTQ9Y2C2 406 aa12.85□□□□□ -0.35
TRA2B-214ENST00000487615 PALMO75781 387 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 GAS8O95995 478 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
TRA2B-214ENST00000487615 APBA1Q02410 837 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 PPP2R5AQ15172 486 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 GRIK5Q16478 980 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 FRMD5Q7Z6J6 570 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 LXNQ9BS40 222 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 DPH5Q9H2P9 285 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms