RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 SLC37A4O43826 429 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 SORBS3O60504 671 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 MYOGP15173 224 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 GCFC2P16383 781 aaKnown RBP12.09□□□□□ -0.47
TOP3B-216ENST00000487485 KCNA2P16389 499 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 UBA1P22314 1058 aaKnown RBP12.09□□□□□ -0.47
TOP3B-216ENST00000487485 TRAPPC10P48553 1259 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 TOB1P50616 345 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-216ENST00000487485 TFF2Q03403 129 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 ARHGAP1Q07960 439 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 LAMC2Q13753 1193 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 CELF3Q5SZQ8 465 aaKnown RBP12.09□□□□□ -0.47
TOP3B-216ENST00000487485 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 BRAPQ7Z569 592 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 MICALL1Q8N3F8 863 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 ZNF577Q9BSK1 485 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 XIRP2A4UGR9 3374 aa12.09□□□□□ -0.47
TOP3B-216ENST00000487485 IPO5O00410 1097 aaKnown RBP12.08□□□□□ -0.48
TOP3B-216ENST00000487485 MCM7P33993 719 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 CCL23P55773 120 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 NKX3-2P78367 333 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 RESTQ13127 1097 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 ITGB3BPQ13352 177 aaPredicted RBP12.08□□□□□ -0.48
TOP3B-216ENST00000487485 PKP1Q13835 747 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 ZNF174Q15697 407 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 RILPL1Q5EBL4 403 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 TTC38Q5R3I4 469 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 CXCL17Q6UXB2 119 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 SLC43A3Q8NBI5 491 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 EMID1Q96A84 441 aaPredicted RBP12.08□□□□□ -0.48
TOP3B-216ENST00000487485 SDF4Q9BRK5 362 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 HIPK3Q9H422 1215 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 ZSCAN16Q9H4T2 348 aaPredicted RBP12.08□□□□□ -0.48
TOP3B-216ENST00000487485 GRIN2DO15399 1336 aa12.08□□□□□ -0.48
TOP3B-216ENST00000487485 RFXAPO00287 272 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
TOP3B-216ENST00000487485 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-216ENST00000487485 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-216ENST00000487485 CPT1AP50416 773 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 KCNQ1P51787 676 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 NBR1Q14596 966 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 FSCN1Q16658 493 aaKnown RBP12.07□□□□□ -0.48
TOP3B-216ENST00000487485 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 BRDTQ58F21 947 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-216ENST00000487485 FOXD4L5Q5VV16 416 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-216ENST00000487485 METTL7BQ6UX53 244 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 POTEDQ86YR6 584 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 ETNPPLQ8TBG4 499 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 AFG1LQ8WV93 481 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 FOXD4L4Q8WXT5 416 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-216ENST00000487485 SLC5A5Q92911 643 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 GJA10Q969M2 543 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 VWCEQ96DN2 955 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 SPATA33Q96N06 139 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 C1QTNF1Q9BXJ1 281 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 TRPV6Q9H1D0 765 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-216ENST00000487485 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
TOP3B-216ENST00000487485 EPHX3Q9H6B9 360 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 TBC1D22BQ9NU19 505 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 SLC9A2Q9UBY0 812 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 PCDHB6Q9Y5E3 794 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 WDR81Q562E7 1941 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 NFASCO94856 1347 aa12.07□□□□□ -0.48
TOP3B-216ENST00000487485 A6NJR5 290 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 DDX39AO00148 427 aaKnown RBP12.06□□□□□ -0.48
TOP3B-216ENST00000487485 NOP56O00567 594 aaKnown RBP12.06□□□□□ -0.48
TOP3B-216ENST00000487485 TBX3O15119 743 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 ZEB2O60315 1214 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 MARCH6O60337 910 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 NEMFO60524 1076 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 BAG4O95429 457 aaKnown RBP12.06□□□□□ -0.48
TOP3B-216ENST00000487485 MMP3P08254 477 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 SP4Q02446 784 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 ORC2Q13416 577 aaPredicted RBP12.06□□□□□ -0.48
TOP3B-216ENST00000487485 ITGA7Q13683 1181 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 CALCRLQ16602 461 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 LRCH2Q5VUJ6 765 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 PPTC7Q8NI37 304 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 HAS1Q92839 578 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 FAM20AQ96MK3 541 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 RIT2Q99578 217 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 NOC4LQ9BVI4 516 aaKnown RBP12.06□□□□□ -0.48
TOP3B-216ENST00000487485 WNT8AQ9H1J5 351 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 JPH1Q9HDC5 661 aaPredicted RBP12.06□□□□□ -0.48
TOP3B-216ENST00000487485 KCNMB3Q9NPA1 279 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 TELO2Q9Y4R8 837 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 SLC4A7Q9Y6M7 1214 aa12.06□□□□□ -0.48
TOP3B-216ENST00000487485 GAS7O60861 476 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 PPFIA4O75335 1185 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 BRD1O95696 1058 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 F13A1P00488 732 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 MYL3P08590 195 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 SKIV2LQ15477 1246 aaKnown RBP12.05□□□□□ -0.48
TOP3B-216ENST00000487485 DGKDQ16760 1214 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 PPP2R2DQ66LE6 453 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 SLFN12Q8IYM2 578 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 SEPT1Q8WYJ6 367 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms