RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 GPRASP2Q96D09 838 aa15.83■□□□□ 0.13
CUX1-209ENST00000487284 WBP1LQ9NX94 342 aa15.83■□□□□ 0.13
CUX1-209ENST00000487284 PKD2L1Q9P0L9 805 aa15.83■□□□□ 0.13
CUX1-209ENST00000487284 GABRQQ9UN88 632 aa15.83■□□□□ 0.13
CUX1-209ENST00000487284 NFE2L3Q9Y4A8 694 aa15.83■□□□□ 0.13
CUX1-209ENST00000487284 CASP8AP2Q9UKL3 1982 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 PVALEFA0A1B0GWK0 134 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 GOLGA6L6A8MZA4 724 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 FKTNO75072 461 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 SPATA31C1P0DKV0 1188 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 ATP1A3P13637 1013 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 FANCCQ00597 558 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 PRKCZQ05513 592 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 CCL14Q16627 93 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 GNPTABQ3T906 1256 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 SPATA1Q5VX52 437 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 B3GNT9Q6UX72 402 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 SEPT14Q6ZU15 432 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 UNC13DQ70J99 1090 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 OTOP1Q7RTM1 612 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 NLRX1Q86UT6 975 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 CATSPER3Q86XQ3 398 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 FBXO16Q8IX29 292 aaPredicted RBP15.83■□□□□ 0.12
CUX1-209ENST00000487284 RIT2Q99578 217 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 APBA2Q99767 749 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 TINF2Q9BSI4 451 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 ZNF577Q9BSK1 485 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 POLR3CQ9BUI4 534 aaPredicted RBP15.83■□□□□ 0.12
CUX1-209ENST00000487284 EXOC1Q9NV70 894 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 FLRT1Q9NZU1 646 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 RWDD2AQ9UIY3 292 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 KIAA1024Q9UPX6 916 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 GDAQ9Y2T3 454 aa15.83■□□□□ 0.12
CUX1-209ENST00000487284 IPO5O00410 1097 aaKnown RBP15.82■□□□□ 0.12
CUX1-209ENST00000487284 GAS7O60861 476 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 ATP9AO75110 1047 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 PRCPP42785 496 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 FLT3LGP49771 235 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 DHX8Q14562 1220 aaKnown RBP15.82■□□□□ 0.12
CUX1-209ENST00000487284 COBLL1Q53SF7 1204 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 KLHL10Q6JEL2 608 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 ZSCAN30Q86W11 494 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 ADSSL1Q8N142 457 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 XPO4Q9C0E2 1151 aaKnown RBP15.82■□□□□ 0.12
CUX1-209ENST00000487284 AGO4Q9HCK5 861 aaKnown RBP15.82■□□□□ 0.12
CUX1-209ENST00000487284 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.82■□□□□ 0.12
CUX1-209ENST00000487284 IFNKQ9P0W0 207 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 CTNND2Q9UQB3 1225 aa15.82■□□□□ 0.12
CUX1-209ENST00000487284 ARID2Q68CP9 1835 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 POTEFA5A3E0 1075 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 ESPNB1AK53 854 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 E9PMD0 336 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 EML1O00423 815 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 SNAI1O95863 264 aaPredicted RBP15.81■□□□□ 0.12
CUX1-209ENST00000487284 TPM3P06753 285 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 PAK1Q13153 545 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 ITGB3BPQ13352 177 aaPredicted RBP15.81■□□□□ 0.12
CUX1-209ENST00000487284 POTEGQ6S5H5 508 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 SPC24Q8NBT2 197 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 EIF2AK1Q9BQI3 630 aaKnown RBP15.81■□□□□ 0.12
CUX1-209ENST00000487284 TEKT3Q9BXF9 490 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 TUFT1Q9NNX1 390 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 SYNGAP1Q96PV0 1343 aa15.81■□□□□ 0.12
CUX1-209ENST00000487284 SPATA31C2B4DYI2 1134 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 MAFGO15525 162 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 PLA2G4BP0C869 781 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 MUTP22033 750 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 ICAM3P32942 547 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 PPP1R2P41236 205 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 EHHADHQ08426 723 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 CDKAL1Q5VV42 579 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 DRC7Q8IY82 874 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 MSL3Q8N5Y2 521 aaKnown RBP15.8■□□□□ 0.12
CUX1-209ENST00000487284 NELFBQ8WX92 580 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 DDX12PQ92771 950 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 DNAJC19Q96DA6 116 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 ERO1AQ96HE7 468 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 CDHR1Q96JP9 859 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 HSD17B14Q9BPX1 270 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 KATNBL1Q9H079 304 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 ZKSCAN5Q9Y2L8 839 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 HTTP42858 3142 aa15.8■□□□□ 0.12
CUX1-209ENST00000487284 DDX39AO00148 427 aaKnown RBP15.79■□□□□ 0.12
CUX1-209ENST00000487284 DHX15O43143 795 aaKnown RBP15.79■□□□□ 0.12
CUX1-209ENST00000487284 CBFA2T2O43439 604 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 KCNA2P16389 499 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 STX17P56962 302 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 STIM1Q13586 685 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 UNC45AQ9H3U1 944 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 VTA1Q9NP79 307 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 PDGFCQ9NRA1 345 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 SAMSN1Q9NSI8 373 aaKnown RBP15.79■□□□□ 0.12
CUX1-209ENST00000487284 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.79■□□□□ 0.12
CUX1-209ENST00000487284 SRRDQ9UH36 339 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 MYH9P35579 1960 aaKnown RBP15.79■□□□□ 0.12
CUX1-209ENST00000487284 PSMA7O14818 248 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 ARIH2O95376 493 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 IGHA2P01877 340 aa15.79■□□□□ 0.12
CUX1-209ENST00000487284 XRCC5P13010 732 aaKnown RBP15.79■□□□□ 0.12
CUX1-209ENST00000487284 CYP2C19P33261 490 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms