RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 KCNH1O95259 989 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 IGKV5-2P06315 115 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 CT47B1P0C2W7 299 aaPredicted RBP7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 HSPA8P11142 646 aaKnown RBP7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 DPEP1P16444 411 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 TGFB2P61812 414 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 ALDH1L2Q3SY69 923 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 TMEM67Q5HYA8 995 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 NBPF5PQ86XG9 351 aaPredicted RBP7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 MRGPRX3Q96LB0 322 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 CDC6Q99741 560 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 MYD88Q99836 296 aa7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 SF3B6Q9Y3B4 125 aaKnown RBP7.77□□□□□ -1.17
RTFDC1-209ENST00000487211 CARMIL3Q8ND23 1372 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 CYP26A1O43174 497 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 NTSR2O95665 410 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 DDX58O95786 925 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 CEACAM5P06731 702 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 CHRNA5P30532 468 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 CPSF6Q16630 551 aaKnown RBP eCLIP7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 NKPD1Q17RQ9 610 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 LONRF2Q1L5Z9 754 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 PARP10Q53GL7 1025 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 HSP90AB3PQ58FF7 597 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 SLC10A5Q5PT55 438 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 YOD1Q5VVQ6 348 aaPredicted RBP7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 ZNF662Q6ZS27 426 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 TRIM59Q8IWR1 403 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 CNBD1Q8NA66 436 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 SLC17A8Q8NDX2 589 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 BTN2A2Q8WVV5 523 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 DNAAF4Q8WXU2 420 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 FAM89AQ96GI7 184 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 IPO9Q96P70 1041 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 UTP14AQ9BVJ6 771 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 BRIP1Q9BX63 1249 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 HDAC8Q9BY41 377 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 GPR62Q9BZJ7 368 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 TRIT1Q9H3H1 467 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 MKNK2Q9HBH9 465 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 GPATCH2Q9NW75 528 aa7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 NOB1Q9ULX3 412 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 SPTBN5Q9NRC6 3674 aaKnown RBP7.76□□□□□ -1.17
RTFDC1-209ENST00000487211 UNC80Q8N2C7 3258 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 KLRG2A4D1S0 409 aaPredicted RBP7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 H0Y8X5 98 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 H3BS24 57 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 DYRK3O43781 588 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 L1CAMP32004 1257 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 ZC3H12BQ5HYM0 836 aaKnown RBP7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 BEND3Q5T5X7 828 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 FOXB2Q5VYV0 432 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 CWF19L1Q69YN2 538 aaKnown RBP7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 C16orf86Q6ZW13 317 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 PPP1R42Q7Z4L9 355 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 ZDHHC13Q8IUH4 622 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 ENOX1Q8TC92 643 aaKnown RBP7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 HSPA12BQ96MM6 686 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 DUSP15Q9H1R2 295 aaPredicted RBP7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 SMC4Q9NTJ3 1288 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 PIM2Q9P1W9 311 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 TRMT112Q9UI30 125 aaKnown RBP7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 PLAGL2Q9UPG8 496 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 ST14Q9Y5Y6 855 aa7.75□□□□□ -1.17
RTFDC1-209ENST00000487211 TRIOBPQ9H2D6 2365 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 NPHP1O15259 732 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 PRODHO43272 600 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 ASMTLO95671 621 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 GSNP06396 782 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 SRGNP10124 158 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 SRFP11831 508 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 PDE6BP35913 854 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 GRIA2P42262 883 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 AMPD2Q01433 879 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 GRB10Q13322 594 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 DPY19L1Q2PZI1 675 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 PLEKHG4Q58EX7 1191 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 FAM209AQ5JX71 171 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 GTF2IRD2BQ6EKJ0 949 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 CRTC3Q6UUV7 619 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 GTF2IRD2Q86UP8 949 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 SLC51AQ86UW1 340 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 C2CD5Q86YS7 1000 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 SPACA3Q8IXA5 215 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 PLD6Q8N2A8 252 aaKnown RBP7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 ZNF655Q8N720 491 aaPredicted RBP7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 DAGLBQ8NCG7 672 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 CCDC191Q8NCU4 936 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 NYXQ9GZU5 481 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 ZSWIM5Q9P217 1185 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 TNNQ9UQP3 1299 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 GPR55Q9Y2T6 319 aaPredicted RBP7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 C10orf71Q711Q0 1435 aa7.74□□□□□ -1.17
RTFDC1-209ENST00000487211 NUP98P52948 1817 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 ABCC12Q96J65 1359 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 VCANP13611 3396 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 TRBV23-1A0A0A0MS06 115 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 WASH4PA8MWX3 477 aa7.73□□□□□ -1.17
RTFDC1-209ENST00000487211 H0YIN7 160 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms