RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 SMYD4Q8IYR2 804 aaPredicted RBP9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 ABRAQ8N0Z2 381 aa9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 ADSSL1Q8N142 457 aa9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 MORC4Q8TE76 937 aa9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 SMCR8Q8TEV9 937 aaPredicted RBP9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 DDX12PQ92771 950 aa9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 MMP19Q99542 508 aa9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 PORCNQ9H237 461 aa9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 EXOC1Q9NV70 894 aa9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 GDAQ9Y2T3 454 aa9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 MKI67P46013 3256 aaKnown RBP9.59□□□□□ -0.87
NUDCD3-209ENST00000487118 SYNRGQ9UMZ2 1314 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 WDR64B1ANS9 1081 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 DDX39AO00148 427 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 TBC1D8O95759 1140 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 CCNE2O96020 404 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 P4HBP07237 508 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 FCER1AP12319 257 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 ZNF18P17022 549 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 CDC25BP30305 580 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 PRCPP42785 496 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 PSMD2Q13200 908 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 KCTD2Q14681 263 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 FAM110CQ1W6H9 321 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 ARSHQ5FYA8 562 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 SPATA1Q5VX52 437 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 CHRDL2Q6WN34 429 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 DYMQ7RTS9 669 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 GPBP1Q86WP2 473 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 TPH2Q8IWU9 490 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 NACC1Q96RE7 527 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 LXNQ9BS40 222 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 ZSWIM4Q9H7M6 989 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 EFCC1Q9HA90 598 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 BMP2KQ9NSY1 1161 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 PKD2L1Q9P0L9 805 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 WRAP73Q9P2S5 460 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 TCEAL9Q9UHQ7 104 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 RWDD2AQ9UIY3 292 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 CENPFP49454 3210 aa9.58□□□□□ -0.88
NUDCD3-209ENST00000487118 ZNF236Q9UL36 1845 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 SSBP05455 408 aaKnown RBP eCLIP9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 QARSP47897 775 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 STK4Q13043 487 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 COASYQ13057 564 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 PAK1Q13153 545 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 STIM1Q13586 685 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 FOXR2Q6PJQ5 311 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 CCDC65Q8IXS2 484 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 C4orf19Q8IY42 314 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 SMAP1Q8IYB5 467 aaPredicted RBP9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 TRMT44Q8IYL2 757 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 ANKRD13CQ8N6S4 541 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 KIAA0895Q8NCT3 520 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 NELFBQ8WX92 580 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 FAM122AQ96E09 287 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 MRFAP1L1Q96HT8 127 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 DHTKD1Q96HY7 919 aaPredicted RBP9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 MPHOSPH6Q99547 160 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 BHMT2Q9H2M3 363 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 PANK4Q9NVE7 773 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 FANCLQ9NW38 375 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 DBR1Q9UK59 544 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 CTNND2Q9UQB3 1225 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 NFE2L3Q9Y4A8 694 aa9.57□□□□□ -0.88
NUDCD3-209ENST00000487118 PLXNB2O15031 1838 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 LOXHD1Q8IVV2 1947 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 PSMA7O14818 248 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 STRNO43815 780 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 ATG7O95352 703 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 PGK2P07205 417 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 TGFB3P10600 412 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 IDEP14735 1019 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 CCNE1P24864 410 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 INHBEP58166 350 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 PSMC5P62195 406 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 PLCB2Q00722 1185 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 GIT2Q14161 759 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 ZNF792Q3KQV3 632 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 FAM26FQ5R3K3 315 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 CDKAL1Q5VV42 579 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 KLHL10Q6JEL2 608 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 RINT1Q6NUQ1 792 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 C1orf186Q6ZWK4 172 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 GUF1Q8N442 669 aaKnown RBP9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 BANK1Q8NDB2 785 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 PIGOQ8TEQ8 1089 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 CCDC102AQ96A19 550 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 RUSC1Q9BVN2 902 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 TRIM5Q9C035 493 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 JPH1Q9HDC5 661 aaPredicted RBP9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 KCND2Q9NZV8 630 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 SLC9A2Q9UBY0 812 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 PCDHA2Q9Y5H9 948 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 PCDHA10Q9Y5I2 948 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 KIAA1217Q5T5P2 1943 aa9.56□□□□□ -0.88
NUDCD3-209ENST00000487118 NPHP3-ACAD11A0A0J9YXS1 232 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms