RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ZNF579Q8NAF0 562 aaKnown RBP14.37□□□□□ -0.11
HDAC6-229ENST00000486665 OR6J1Q8NGC5 347 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 AFG1LQ8WV93 481 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 EPSTI1Q96J88 318 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 GPR20Q99678 358 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 MMTAG2Q9BU76 263 aaKnown RBP14.37□□□□□ -0.11
HDAC6-229ENST00000486665 LMBRD1Q9NUN5 540 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 DUSP11O75319 330 aaKnown RBP14.36□□□□□ -0.11
HDAC6-229ENST00000486665 ATG7O95352 703 aa14.36□□□□□ -0.11
HDAC6-229ENST00000486665 MCM4P33991 863 aa14.36□□□□□ -0.11
HDAC6-229ENST00000486665 EPHA7Q15375 998 aa14.36□□□□□ -0.11
HDAC6-229ENST00000486665 CSPP1Q1MSJ5 1256 aa14.36□□□□□ -0.11
HDAC6-229ENST00000486665 MIER3Q7Z3K6 550 aa14.36□□□□□ -0.11
HDAC6-229ENST00000486665 EMID1Q96A84 441 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-229ENST00000486665 FAM161BQ96MY7 647 aa14.36□□□□□ -0.11
HDAC6-229ENST00000486665 SPATA33Q96N06 139 aa14.36□□□□□ -0.11
HDAC6-229ENST00000486665 DISC1Q9NRI5 854 aa14.36□□□□□ -0.11
HDAC6-229ENST00000486665 ATP11BQ9Y2G3 1177 aa14.36□□□□□ -0.11
HDAC6-229ENST00000486665 PRUNE2Q8WUY3 3088 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 CTAGE5O15320 804 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 MSCO60682 206 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 SLITRK3O94933 977 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 CMA1P23946 247 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 ECM1Q16610 540 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 C9orf50Q5SZB4 431 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 RESP18Q5W5W9 173 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 SLC39A5Q6ZMH5 540 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 SH3RF1Q7Z6J0 888 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 TLK2Q86UE8 772 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 SEPT1Q8WYJ6 367 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 SYMPKQ92797 1274 aaKnown RBP14.35□□□□□ -0.11
HDAC6-229ENST00000486665 DYDC2Q96IM9 177 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 AK8Q96MA6 479 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 PCYT2Q99447 389 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 HSD17B14Q9BPX1 270 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 EIF2AK1Q9BQI3 630 aaKnown RBP14.35□□□□□ -0.11
HDAC6-229ENST00000486665 PANK2Q9BZ23 570 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 AP5M1Q9H0R1 490 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 RGL1Q9NZL6 768 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 Q9Y3F1 56 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 PCDHA10Q9Y5I2 948 aa14.35□□□□□ -0.11
HDAC6-229ENST00000486665 A0A087WWV3 80 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 A0A1B0GVL5 298 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 A0A1W2PQ27 194 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 A0A1W2PQ64 194 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 A0A1W2PQD8 194 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 MYADML2A6NDP7 307 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 WDR64B1ANS9 1081 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 MED24O75448 989 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 PGK1P00558 417 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-229ENST00000486665 SUPT20HL2P0C7V6 817 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 SPATA31C1P0DKV0 1188 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 RARBP10826 455 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 SFNP31947 248 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 JAK3P52333 1124 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 GJA9P57773 515 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 BEX3Q00994 111 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 CTTNQ14247 550 aaKnown RBP14.34□□□□□ -0.11
HDAC6-229ENST00000486665 TRIM60Q495X7 471 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 SWSAP1Q6NVH7 229 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 CABP7Q86V35 215 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 SMAP1Q8IYB5 467 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-229ENST00000486665 RDM1Q8NG50 284 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 PPTC7Q8NI37 304 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 PNMA5Q96PV4 448 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 RAB34Q9BZG1 259 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 CCSER1Q9C0I3 900 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 UPF3AQ9H1J1 476 aaKnown RBP14.34□□□□□ -0.11
HDAC6-229ENST00000486665 GOLPH3LQ9H4A5 285 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 SAMM50Q9Y512 469 aa14.34□□□□□ -0.11
HDAC6-229ENST00000486665 DOCK5Q9H7D0 1870 aa14.33□□□□□ -0.11
HDAC6-229ENST00000486665 A0A087X0B3 334 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 IGKV6D-21A0A0A0MT36 114 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 TRIM43BA6NCK2 446 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 A6NJR5 290 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 NOP56O00567 594 aaKnown RBP14.33□□□□□ -0.12
HDAC6-229ENST00000486665 PSAPP07602 524 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 MMP3P08254 477 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 TCF7P36402 384 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-229ENST00000486665 CCT6AP40227 531 aaKnown RBP14.33□□□□□ -0.12
HDAC6-229ENST00000486665 UBA7P41226 1012 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 CYP4A11Q02928 519 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 SNX17Q15036 470 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 LRRC41Q15345 812 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 SHHQ15465 462 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 ZRSR1Q15695 479 aaKnown RBP14.33□□□□□ -0.12
HDAC6-229ENST00000486665 UGCGQ16739 394 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 UTP14CQ5TAP6 766 aaKnown RBP14.33□□□□□ -0.12
HDAC6-229ENST00000486665 KRT79Q5XKE5 535 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 MIS18BP1Q6P0N0 1132 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 CATSPER3Q86XQ3 398 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 CCDC60Q8IWA6 550 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-229ENST00000486665 FSIP1Q8NA03 581 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 BANK1Q8NDB2 785 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 SNX29Q8TEQ0 813 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 TRIM43Q96BQ3 446 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-229ENST00000486665 PLIN2Q99541 437 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 LBHD1Q9BQE6 289 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-229ENST00000486665 POLR3CQ9BUI4 534 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms