RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ANO3Q9BYT9 981 aa8□□□□□ -1.13
VPS50-218ENST00000485994 KCNH7Q9NS40 1196 aa8□□□□□ -1.13
VPS50-218ENST00000485994 ZNF215Q9UL58 517 aaPredicted RBP8□□□□□ -1.13
VPS50-218ENST00000485994 NOD1Q9Y239 953 aa8□□□□□ -1.13
VPS50-218ENST00000485994 MYH9P35579 1960 aaKnown RBP8□□□□□ -1.13
VPS50-218ENST00000485994 NRCAMQ92823 1304 aa8□□□□□ -1.13
VPS50-218ENST00000485994 IGKV6D-21A0A0A0MT36 114 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 EFCAB14O75071 495 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 BAIAP3O94812 1187 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 RPLP2P05387 115 aaKnown RBP7.99□□□□□ -1.13
VPS50-218ENST00000485994 CKBP12277 381 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 USP11P51784 963 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 ARHGAP4P98171 946 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 SSRP1Q08945 709 aaKnown RBP7.99□□□□□ -1.13
VPS50-218ENST00000485994 HIC1Q14526 733 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 ANKRD1Q15327 319 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 RAB30Q15771 203 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 GALNT17Q6IS24 598 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 CPLX2Q6PUV4 134 aaKnown RBP7.99□□□□□ -1.13
VPS50-218ENST00000485994 TRAF7Q6Q0C0 670 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 PLPPR4Q7Z2D5 763 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 IL27Q8NEV9 243 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 CCDC148Q8NFR7 591 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 C22orf23Q9BZE7 217 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 TTYH1Q9H313 450 aaPredicted RBP7.99□□□□□ -1.13
VPS50-218ENST00000485994 SMARCAD1Q9H4L7 1026 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 PDRG1Q9NUG6 133 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 CXXC1Q9P0U4 656 aaPredicted RBP7.99□□□□□ -1.13
VPS50-218ENST00000485994 SLC4A7Q9Y6M7 1214 aa7.99□□□□□ -1.13
VPS50-218ENST00000485994 A0A0C4DFX4 3053 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 WDR81Q562E7 1941 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 IGLV3-22A0A075B6J6 115 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 ABHD14A-ACY1A0A1B0GW23 586 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 MBLAC1A4D2B0 266 aaPredicted RBP7.98□□□□□ -1.13
VPS50-218ENST00000485994 RRN3P2A6NIE6 340 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 M0R2N6 131 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 DHX15O43143 795 aaKnown RBP7.98□□□□□ -1.13
VPS50-218ENST00000485994 DEXIO95424 95 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 ZNF286BP0CG31 522 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 SMIM10L2AP0DMW4 78 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 SMIM10L2BP0DMW5 78 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 ARP10275 920 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 DNAJB2P25686 324 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 TCF7P36402 384 aaPredicted RBP7.98□□□□□ -1.13
VPS50-218ENST00000485994 SLC26A2P50443 739 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 ZNF200P98182 395 aaPredicted RBP7.98□□□□□ -1.13
VPS50-218ENST00000485994 FAM26DQ5JW98 314 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 Q7L0L9 218 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 LRRC8DQ7L1W4 858 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 OTOP2Q7RTS6 562 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 TRIM22Q8IYM9 498 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 DAGLBQ8NCG7 672 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 CYP2W1Q8TAV3 490 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 ATP6V0A1Q93050 837 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 PHKBQ93100 1093 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 GUCD1Q96NT3 240 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 ZBED2Q9BTP6 218 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 PBX4Q9BYU1 374 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 AGO4Q9HCK5 861 aaKnown RBP7.98□□□□□ -1.13
VPS50-218ENST00000485994 TBC1D22BQ9NU19 505 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 ERAP1Q9NZ08 941 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 SLC9A2Q9UBY0 812 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 MSRAQ9UJ68 235 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 NAP1L2Q9ULW6 460 aaPredicted RBP7.98□□□□□ -1.13
VPS50-218ENST00000485994 PCDHA11Q9Y5I1 949 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 EMSYQ7Z589 1322 aa7.98□□□□□ -1.13
VPS50-218ENST00000485994 EVPLQ92817 2033 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 NCOR1O75376 2440 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 CYP3A7-CYP3A51PA0A087WV96 503 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 RSPH10B2B2RC85 870 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 FAM86B1E9PN63 330 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 LCE2BO14633 110 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 CPLX1O14810 134 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 TREHO43280 583 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 EDIL3O43854 480 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 PFKFB2O60825 505 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 NBNO60934 754 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 CDKL5O76039 1030 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 FAM86B2P0C5J1 330 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 RSPH10BP0C881 870 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 POU3F3P20264 500 aaPredicted RBP7.97□□□□□ -1.13
VPS50-218ENST00000485994 CYP3A7P24462 503 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 ZNF76P36508 570 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 CCT2P78371 535 aaKnown RBP7.97□□□□□ -1.13
VPS50-218ENST00000485994 SETQ01105 290 aaPredicted RBP7.97□□□□□ -1.13
VPS50-218ENST00000485994 ZNF618Q5T7W0 954 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 JAKMIP3Q5VZ66 844 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 TAF2Q6P1X5 1199 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 CNKSR3Q6P9H4 555 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 MOXD1Q6UVY6 613 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 ABHD15Q6UXT9 468 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 Q6ZNB5 142 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 DEFB128Q7Z7B8 93 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 PLA2G4DQ86XP0 818 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 REXO1Q8N1G1 1221 aaKnown RBP7.97□□□□□ -1.13
VPS50-218ENST00000485994 TIFAQ96CG3 184 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 SLC9A7Q96T83 725 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 PCYT2Q99447 389 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 CDX2Q99626 313 aaPredicted RBP7.97□□□□□ -1.13
VPS50-218ENST00000485994 SDF4Q9BRK5 362 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms