RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 ATG7O95352 703 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 PARNO95453 639 aaKnown RBP20.88■□□□□ 0.93
COL1A1-206ENST00000485870 CTSHP09668 335 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 RSPH10BP0C881 870 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 MBTPS1Q14703 1052 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 NONOQ15233 471 aaKnown RBP eCLIP20.88■□□□□ 0.93
COL1A1-206ENST00000485870 ABHD15Q6UXT9 468 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 KRT25Q7Z3Z0 450 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 KIF2CQ99661 725 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 PBX4Q9BYU1 374 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 TTYH1Q9H313 450 aaPredicted RBP20.88■□□□□ 0.93
COL1A1-206ENST00000485870 TCEAL9Q9UHQ7 104 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 LIMCH1Q9UPQ0 1083 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 MSH4O15457 936 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 TDP2O95551 362 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 CXCL10P02778 98 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 FOSBP53539 338 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 ST3GAL1Q11201 340 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 PLCB4Q15147 1175 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 INF2Q27J81 1249 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 FAM160B1Q5W0V3 765 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 MIS18BP1Q6P0N0 1132 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 RUFY4Q6ZNE9 571 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 PLPPR4Q7Z2D5 763 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 TIFAQ96CG3 184 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 SEMA6BQ9H3T3 888 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 TUBE1Q9UJT0 475 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 GBF1Q92538 1859 aa20.87■□□□□ 0.93
COL1A1-206ENST00000485870 CDH23Q9H251 3354 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 IGKV6D-21A0A0A0MT36 114 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 CCDC194A0A1B0GVG4 234 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 INSRRP14616 1297 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 ATP2A2P16615 1042 aaKnown RBP20.86■□□□□ 0.93
COL1A1-206ENST00000485870 RABGGTBP53611 331 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 ZNF746Q6NUN9 644 aaPredicted RBP20.86■□□□□ 0.93
COL1A1-206ENST00000485870 CNKSR3Q6P9H4 555 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 CCDC60Q8IWA6 550 aaPredicted RBP20.86■□□□□ 0.93
COL1A1-206ENST00000485870 OXER1Q8TDS5 423 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 ZBTB10Q96DT7 871 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 GUCD1Q96NT3 240 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 ZNF302Q9NR11 478 aa20.86■□□□□ 0.93
COL1A1-206ENST00000485870 POTEB3A0JP26 581 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 CAND2O75155 1236 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 RBM25P49756 843 aaKnown RBP20.85■□□□□ 0.93
COL1A1-206ENST00000485870 KRT76Q01546 638 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 RAB30Q15771 203 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 TCTN1Q2MV58 587 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 MARCH8Q5T0T0 291 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 SWSAP1Q6NVH7 229 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 PDXDC2PQ6P474 469 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 POTEBQ6S5H4 581 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 CCDC83Q8IWF9 413 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 TRAPPC12Q8WVT3 735 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 GJA10Q969M2 543 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 MSRAQ9UJ68 235 aa20.85■□□□□ 0.93
COL1A1-206ENST00000485870 TMEM265A0A087WTH1 108 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 MBLAC1A4D2B0 266 aaPredicted RBP20.84■□□□□ 0.93
COL1A1-206ENST00000485870 RRN3P2A6NIE6 340 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 GAS7O60861 476 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 BAIAP3O94812 1187 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 SLC26A2P50443 739 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 LETM2Q2VYF4 491 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 Q4G0T1 1027 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 LRCH2Q5VUJ6 765 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 TAF2Q6P1X5 1199 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 PIK3AP1Q6ZUJ8 805 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 SMAP1Q8IYB5 467 aaPredicted RBP20.84■□□□□ 0.93
COL1A1-206ENST00000485870 TNPO1Q92973 898 aaKnown RBP20.84■□□□□ 0.93
COL1A1-206ENST00000485870 NKX2-4Q9H2Z4 354 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 YBX2Q9Y2T7 364 aaKnown RBP20.84■□□□□ 0.93
COL1A1-206ENST00000485870 SAMM50Q9Y512 469 aa20.84■□□□□ 0.93
COL1A1-206ENST00000485870 MYH9P35579 1960 aaKnown RBP20.84■□□□□ 0.93
COL1A1-206ENST00000485870 MYO9BQ13459 2157 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 CYP3A7-CYP3A51PA0A087WV96 503 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 CHMP2AO43633 222 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 PSAPP07602 524 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 CYP3A7P24462 503 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 KRT2P35908 639 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 KCNJ6P48051 423 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 MOXD1Q6UVY6 613 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 CKAP2LQ8IYA6 745 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 DNAJB3Q8WWF6 145 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 SLC5A5Q92911 643 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 SLC9A7Q96T83 725 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 RIT2Q99578 217 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 TEKT3Q9BXF9 490 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 UPF2Q9HAU5 1272 aaKnown RBP20.83■□□□□ 0.93
COL1A1-206ENST00000485870 BRMS1Q9HCU9 246 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 DDX25Q9UHL0 483 aaKnown RBP20.83■□□□□ 0.93
COL1A1-206ENST00000485870 PCDHA10Q9Y5I2 948 aa20.83■□□□□ 0.93
COL1A1-206ENST00000485870 COL6A3P12111 3177 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 WDR64B1ANS9 1081 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 MYOGP15173 224 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 WDR5P61964 334 aaKnown RBP20.82■□□□□ 0.92
COL1A1-206ENST00000485870 NR5A1Q13285 461 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 TRMT1LQ7Z2T5 733 aaKnown RBP20.82■□□□□ 0.92
COL1A1-206ENST00000485870 NEK8Q86SG6 692 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 RSPH3Q86UC2 560 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 ATP8B4Q8TF62 1192 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 ZSCAN31Q96LW9 406 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms