RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CHRNA1P02708 482 aa19.59■□□□□ 0.73
SMC4-216ENST00000485645 RCAN1P53805 252 aa19.59■□□□□ 0.73
SMC4-216ENST00000485645 CYP2W1Q8TAV3 490 aa19.59■□□□□ 0.73
SMC4-216ENST00000485645 SAMD11Q96NU1 681 aa19.59■□□□□ 0.73
SMC4-216ENST00000485645 SDF4Q9BRK5 362 aa19.59■□□□□ 0.73
SMC4-216ENST00000485645 ANO3Q9BYT9 981 aa19.59■□□□□ 0.73
SMC4-216ENST00000485645 GLT8D2Q9H1C3 349 aa19.59■□□□□ 0.73
SMC4-216ENST00000485645 FAM217BQ9NTX9 383 aaPredicted RBP19.59■□□□□ 0.73
SMC4-216ENST00000485645 BARHL2Q9NY43 387 aa19.59■□□□□ 0.73
SMC4-216ENST00000485645 NFASCO94856 1347 aa19.58■□□□□ 0.73
SMC4-216ENST00000485645 MBLAC1A4D2B0 266 aaPredicted RBP19.58■□□□□ 0.72
SMC4-216ENST00000485645 RRN3P2A6NIE6 340 aa19.58■□□□□ 0.72
SMC4-216ENST00000485645 GHRP10912 638 aa19.58■□□□□ 0.72
SMC4-216ENST00000485645 CDC27P30260 824 aa19.58■□□□□ 0.72
SMC4-216ENST00000485645 IGBP1P78318 339 aa19.58■□□□□ 0.72
SMC4-216ENST00000485645 AP3B2Q13367 1082 aa19.58■□□□□ 0.72
SMC4-216ENST00000485645 CEP55Q53EZ4 464 aa19.58■□□□□ 0.72
SMC4-216ENST00000485645 DNAJB3Q8WWF6 145 aa19.58■□□□□ 0.72
SMC4-216ENST00000485645 TNPO1Q92973 898 aaKnown RBP19.58■□□□□ 0.72
SMC4-216ENST00000485645 PCYT2Q99447 389 aa19.58■□□□□ 0.72
SMC4-216ENST00000485645 CCDC196A0A1B0GTZ2 297 aa19.57■□□□□ 0.72
SMC4-216ENST00000485645 RPLP2P05387 115 aaKnown RBP19.57■□□□□ 0.72
SMC4-216ENST00000485645 ARP10275 920 aa19.57■□□□□ 0.72
SMC4-216ENST00000485645 INSRRP14616 1297 aa19.57■□□□□ 0.72
SMC4-216ENST00000485645 ZNF76P36508 570 aa19.57■□□□□ 0.72
SMC4-216ENST00000485645 MGAT3Q09327 533 aa19.57■□□□□ 0.72
SMC4-216ENST00000485645 MARCH8Q5T0T0 291 aa19.57■□□□□ 0.72
SMC4-216ENST00000485645 NECAB3Q96P71 396 aaPredicted RBP19.57■□□□□ 0.72
SMC4-216ENST00000485645 ADD1P35611 737 aaKnown RBP19.56■□□□□ 0.72
SMC4-216ENST00000485645 SREBF1P36956 1147 aa19.56■□□□□ 0.72
SMC4-216ENST00000485645 CLK2P49760 499 aaKnown RBP19.56■□□□□ 0.72
SMC4-216ENST00000485645 METAP2P50579 478 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMC4-216ENST00000485645 ACTR2P61160 394 aa19.56■□□□□ 0.72
SMC4-216ENST00000485645 LPIN1Q14693 890 aa19.56■□□□□ 0.72
SMC4-216ENST00000485645 EPC2Q52LR7 807 aa19.56■□□□□ 0.72
SMC4-216ENST00000485645 PLPPR4Q7Z2D5 763 aa19.56■□□□□ 0.72
SMC4-216ENST00000485645 AGO4Q9HCK5 861 aaKnown RBP19.56■□□□□ 0.72
SMC4-216ENST00000485645 TMEM260Q9NX78 707 aa19.56■□□□□ 0.72
SMC4-216ENST00000485645 TRPC6Q9Y210 931 aa19.56■□□□□ 0.72
SMC4-216ENST00000485645 MEIS1O00470 390 aa19.55■□□□□ 0.72
SMC4-216ENST00000485645 CPA1P15085 419 aa19.55■□□□□ 0.72
SMC4-216ENST00000485645 STAT5BP51692 787 aa19.55■□□□□ 0.72
SMC4-216ENST00000485645 APOBRQ0VD83 1088 aa19.55■□□□□ 0.72
SMC4-216ENST00000485645 PFKFB3Q16875 520 aaPredicted RBP19.55■□□□□ 0.72
SMC4-216ENST00000485645 FBXO47Q5MNV8 452 aa19.55■□□□□ 0.72
SMC4-216ENST00000485645 KCNB2Q92953 911 aa19.55■□□□□ 0.72
SMC4-216ENST00000485645 FAM49AQ9H0Q0 323 aaPredicted RBP19.55■□□□□ 0.72
SMC4-216ENST00000485645 CDY2AQ9Y6F7 541 aa19.55■□□□□ 0.72
SMC4-216ENST00000485645 BRWD1Q9NSI6 2320 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 BDP1A6H8Y1 2624 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 SCG2P13521 617 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 MRPS6P82932 125 aaKnown RBP19.54■□□□□ 0.72
SMC4-216ENST00000485645 ITGB3BPQ13352 177 aaPredicted RBP19.54■□□□□ 0.72
SMC4-216ENST00000485645 PLCB4Q15147 1175 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 PTPROQ16827 1216 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 IER5Q5VY09 327 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 JAKMIP3Q5VZ66 844 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 TSHZ1Q6ZSZ6 1077 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 Q6ZUG5 572 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 NIPA1Q7RTP0 329 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 TMEM192Q8IY95 271 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 BRF1Q92994 677 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 MRPL38Q96DV4 380 aaKnown RBP19.54■□□□□ 0.72
SMC4-216ENST00000485645 IL17RAQ96F46 866 aa19.54■□□□□ 0.72
SMC4-216ENST00000485645 JAKMIP1Q96N16 626 aaKnown RBP19.54■□□□□ 0.72
SMC4-216ENST00000485645 H3BNC9 293 aa19.53■□□□□ 0.72
SMC4-216ENST00000485645 ENPP3O14638 875 aa19.53■□□□□ 0.72
SMC4-216ENST00000485645 ATG7O95352 703 aa19.53■□□□□ 0.72
SMC4-216ENST00000485645 HSPA4P34932 840 aa19.53■□□□□ 0.72
SMC4-216ENST00000485645 GPM6BQ13491 265 aa19.53■□□□□ 0.72
SMC4-216ENST00000485645 BLOC1S2Q6QNY1 142 aa19.53■□□□□ 0.72
SMC4-216ENST00000485645 FIBCD1Q8N539 461 aa19.53■□□□□ 0.72
SMC4-216ENST00000485645 ZBTB10Q96DT7 871 aa19.53■□□□□ 0.72
SMC4-216ENST00000485645 SNX14Q9Y5W7 946 aa19.53■□□□□ 0.72
SMC4-216ENST00000485645 COL4A6Q14031 1691 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 POTEB3A0JP26 581 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 M0QZ92 97 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 SLC26A2P50443 739 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 MCTP2Q6DN12 878 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 POTEBQ6S5H4 581 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 PLA2G4DQ86XP0 818 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 CCDC12Q8WUD4 166 aaPredicted RBP19.52■□□□□ 0.72
SMC4-216ENST00000485645 TRAPPC12Q8WVT3 735 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 CCDC136Q96JN2 1154 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 ZMYND12Q9H0C1 365 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 UBE2ZQ9H832 354 aaPredicted RBP19.52■□□□□ 0.72
SMC4-216ENST00000485645 PCDHA2Q9Y5H9 948 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 SQORQ9Y6N5 450 aa19.52■□□□□ 0.72
SMC4-216ENST00000485645 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.51■□□□□ 0.71
SMC4-216ENST00000485645 ESYT2A0FGR8 921 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 FAM86B1E9PN63 330 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 DDX39AO00148 427 aaKnown RBP19.51■□□□□ 0.71
SMC4-216ENST00000485645 BACH1O14867 736 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 CYP3A4P08684 503 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 FAM86B2P0C5J1 330 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 CD52P31358 61 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 FAM160B1Q5W0V3 765 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 ABHD15Q6UXT9 468 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 AGO3Q9H9G7 860 aaKnown RBP19.51■□□□□ 0.71
SMC4-216ENST00000485645 C6orf50Q9HD87 102 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms