RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 A0A1W2PQJ5 194 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 LCHNA4D1U4 455 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 TRIM75PA6NK02 468 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 F8W031 263 aaPredicted RBP6.92□□□□□ -1.3
SRRM1-213ENST00000485441 HIP1RO75146 1068 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 RBP3P10745 1247 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 RAC2P15153 192 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 ARL4AP40617 200 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 IARSP41252 1262 aaKnown RBP6.92□□□□□ -1.3
SRRM1-213ENST00000485441 GPR3P46089 330 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 FNTBP49356 437 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 ABHD4Q8TB40 342 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 FOXRED1Q96CU9 486 aaPredicted RBP6.92□□□□□ -1.3
SRRM1-213ENST00000485441 TCF7L1Q9HCS4 588 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 PCMTD2Q9NV79 361 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 HSPBP1Q9NZL4 362 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 TCEAL9Q9UHQ7 104 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 HCFC2Q9Y5Z7 792 aa6.92□□□□□ -1.3
SRRM1-213ENST00000485441 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PCDHGA12O60330 932 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 HERVK_113P62684 666 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 KRT85P78386 507 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PIN1Q13526 163 aaPredicted RBP6.91□□□□□ -1.3
SRRM1-213ENST00000485441 NR1I3Q14994 352 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 TMEM132BQ14DG7 1078 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PCBP2Q15366 365 aaKnown RBP eCLIP6.91□□□□□ -1.3
SRRM1-213ENST00000485441 EPHA7Q15375 998 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 ABCB5Q2M3G0 1257 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 NOL8Q76FK4 1167 aaKnown RBP6.91□□□□□ -1.3
SRRM1-213ENST00000485441 ZZZ3Q8IYH5 903 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 C1orf162Q8NEQ5 155 aaPredicted RBP6.91□□□□□ -1.3
SRRM1-213ENST00000485441 TSPAN17Q96FV3 270 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 FAXDC2Q96IV6 333 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 AP5M1Q9H0R1 490 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PCIF1Q9H4Z3 704 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 RIC8BQ9NVN3 520 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 ZIM2Q9NZV7 527 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 KLHL14Q9P2G3 628 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PCDHGA9Q9Y5G4 932 aaKnown RBP6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PCDHGA8Q9Y5G5 932 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PCDHGA7Q9Y5G6 932 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PCDHGA6Q9Y5G7 932 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PCDHGA3Q9Y5H0 932 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 PCDHGA2Q9Y5H1 932 aa6.91□□□□□ -1.3
SRRM1-213ENST00000485441 E2F8A0AVK6 867 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 FAHP16930 419 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 SDHBP21912 280 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 THBS2P35442 1172 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 AFMP43652 599 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 YBX1P67809 324 aaKnown RBP6.9□□□□□ -1.3
SRRM1-213ENST00000485441 GRIN1Q05586 938 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 LRP8Q14114 963 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 SLC9A5Q14940 896 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 PPP2R5AQ15172 486 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 PTPN21Q16825 1174 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 PAN2Q504Q3 1202 aaKnown RBP6.9□□□□□ -1.3
SRRM1-213ENST00000485441 RPTNQ6XPR3 784 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 EP400NLQ6ZTU2 488 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 FRMD7Q6ZUT3 714 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 CBLL1Q75N03 491 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 RTN4RL1Q86UN2 441 aaPredicted RBP6.9□□□□□ -1.3
SRRM1-213ENST00000485441 ZBTB46Q86UZ6 589 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 ABI1Q8IZP0 508 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 C8orf48Q96LL4 319 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 RHOBTB2Q9BYZ6 727 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 SEMA4AQ9H3S1 761 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 AASDHPPTQ9NRN7 309 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 BTBD7Q9P203 1132 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 NUDT5Q9UKK9 219 aa6.9□□□□□ -1.3
SRRM1-213ENST00000485441 NOC2LQ9Y3T9 749 aaKnown RBP6.9□□□□□ -1.3
SRRM1-213ENST00000485441 GOLGA6L22H0YM25 854 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 FOXP2O15409 715 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 RFPL1O75677 317 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 SCGB1D2O95969 90 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 LRG1P02750 347 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 MYBL2P10244 700 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 CD40P25942 277 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 MAPKAPK2P49137 400 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 PRR5P85299 388 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 HSP90AB2PQ58FF8 381 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 MIB1Q86YT6 1006 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 ASB15Q8WXK1 588 aa6.89□□□□□ -1.31
SRRM1-213ENST00000485441 RTF1Q92541 710 aaKnown RBP6.89□□□□□ -1.31
SRRM1-213ENST00000485441 H2AFYO75367 372 aaKnown RBP6.88□□□□□ -1.31
SRRM1-213ENST00000485441 MT-CO1P00395 513 aa6.88□□□□□ -1.31
SRRM1-213ENST00000485441 MPOP05164 745 aa6.88□□□□□ -1.31
SRRM1-213ENST00000485441 MMEP08473 750 aa6.88□□□□□ -1.31
SRRM1-213ENST00000485441 SCAND1P57086 179 aa6.88□□□□□ -1.31
SRRM1-213ENST00000485441 ADCY1Q08828 1119 aa6.88□□□□□ -1.31
SRRM1-213ENST00000485441 ODF1Q14990 250 aa6.88□□□□□ -1.31
SRRM1-213ENST00000485441 PROSER1Q86XN7 944 aa6.88□□□□□ -1.31
SRRM1-213ENST00000485441 INTS4Q96HW7 963 aaKnown RBP6.88□□□□□ -1.31
SRRM1-213ENST00000485441 GEMIN8Q9NWZ8 242 aaKnown RBP6.88□□□□□ -1.31
SRRM1-213ENST00000485441 USP36Q9P275 1121 aaKnown RBP6.88□□□□□ -1.31
SRRM1-213ENST00000485441 GOLGA8AA7E2F4 631 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 GOLGA8BA8MQT2 603 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 NUDT19A8MXV4 375 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 ELL2O00472 640 aaPredicted RBP6.87□□□□□ -1.31
SRRM1-213ENST00000485441 MPIG6BO95866 241 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms