RNA–Protein interactions for RNA: ENST00000485412.1

SQSTM1-208, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 656 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-208ENST00000485412 CCDC82Q8N4S0 544 aa15.92■□□□□ 0.14
SQSTM1-208ENST00000485412 CTCFLQ8NI51 663 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-208ENST00000485412 LSG1Q9H089 658 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-208ENST00000485412 IGFLR1Q9H665 355 aa15.92■□□□□ 0.14
SQSTM1-208ENST00000485412 MUTYHQ9UIF7 546 aa15.92■□□□□ 0.14
SQSTM1-208ENST00000485412 TRIOO75962 3097 aa15.92■□□□□ 0.14
SQSTM1-208ENST00000485412 ADGRA3Q8IWK6 1321 aa15.92■□□□□ 0.14
SQSTM1-208ENST00000485412 DLX2Q07687 328 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-208ENST00000485412 MGAT3Q09327 533 aa15.91■□□□□ 0.14
SQSTM1-208ENST00000485412 SMAD4Q13485 552 aaKnown RBP15.91■□□□□ 0.14
SQSTM1-208ENST00000485412 CTC1Q2NKJ3 1217 aa15.91■□□□□ 0.14
SQSTM1-208ENST00000485412 MAP3K14Q99558 947 aa15.91■□□□□ 0.14
SQSTM1-208ENST00000485412 SENP7Q9BQF6 1050 aa15.91■□□□□ 0.14
SQSTM1-208ENST00000485412 CD207Q9UJ71 328 aa15.91■□□□□ 0.14
SQSTM1-208ENST00000485412 STXBP3O00186 592 aa15.9■□□□□ 0.14
SQSTM1-208ENST00000485412 SLC27A2O14975 620 aa15.9■□□□□ 0.14
SQSTM1-208ENST00000485412 BTG3Q14201 252 aaPredicted RBP15.9■□□□□ 0.14
SQSTM1-208ENST00000485412 LPIN1Q14693 890 aa15.9■□□□□ 0.14
SQSTM1-208ENST00000485412 MARCH8Q5T0T0 291 aa15.9■□□□□ 0.14
SQSTM1-208ENST00000485412 CUL5Q93034 780 aa15.9■□□□□ 0.14
SQSTM1-208ENST00000485412 PCYT2Q99447 389 aa15.9■□□□□ 0.14
SQSTM1-208ENST00000485412 EHMT1Q9H9B1 1298 aa15.9■□□□□ 0.14
SQSTM1-208ENST00000485412 SEC63Q9UGP8 760 aaKnown RBP15.9■□□□□ 0.14
SQSTM1-208ENST00000485412 WDFY4Q6ZS81 3184 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 TBX10O75333 385 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 KIF5BP33176 963 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 GTF2F1P35269 517 aaKnown RBP eCLIP15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 NDUFV1P49821 464 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 PPFIA1Q13136 1202 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 GRIK4Q16099 956 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 HERC4Q5GLZ8 1057 aaPredicted RBP15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 TYW1BQ6NUM6 668 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 CASC1Q6TDU7 716 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 NFXL1Q6ZNB6 911 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 RSPH3Q86UC2 560 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 RNF135Q8IUD6 432 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 DNAJB3Q8WWF6 145 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 LINC01599Q8WXQ3 324 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 PPP2R3CQ969Q6 453 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 GPRASP2Q96D09 838 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 PGBD1Q96JS3 809 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 PSTPIP2Q9H939 334 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 RC3H2Q9HBD1 1191 aaKnown RBP15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 UBIAD1Q9Y5Z9 338 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 NRCAMQ92823 1304 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 TECTAO75443 2155 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 EVPLQ92817 2033 aa15.89■□□□□ 0.13
SQSTM1-208ENST00000485412 PLXNA4Q9HCM2 1894 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 CCDC69A6NI79 296 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 LINC01565O15544 149 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 MMP1P03956 469 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 SMARCA1P28370 1054 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 IGBP1P78318 339 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 TAF2Q6P1X5 1199 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 XRRA1Q6P2D8 792 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 TMTC3Q6ZXV5 915 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 NLRX1Q86UT6 975 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 CYP2W1Q8TAV3 490 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 TRAPPC12Q8WVT3 735 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 CLP1Q92989 425 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 PLVAPQ9BX97 442 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 AGO3Q9H9G7 860 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 TUBE1Q9UJT0 475 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 PCDHA6Q9UN73 950 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 PCDHA8Q9Y5H6 950 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 WDR81Q562E7 1941 aa15.88■□□□□ 0.13
SQSTM1-208ENST00000485412 MBLAC1A4D2B0 266 aaPredicted RBP15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 ENPP3O14638 875 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 MCM5P33992 734 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 MTMR1Q13613 665 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 FBXO47Q5MNV8 452 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 CREB3L3Q68CJ9 461 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 WWC2Q6AWC2 1192 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 HEATR3Q7Z4Q2 680 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 MICU3Q86XE3 530 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 SEPT1Q8WYJ6 367 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 EDAQ92838 391 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 TCEANC2Q96MN5 208 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 LZTS2Q9BRK4 669 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 ESYT1Q9BSJ8 1104 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 FAM49AQ9H0Q0 323 aaPredicted RBP15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 ALG13Q9NP73 1137 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 CDY2AQ9Y6F7 541 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 CNTNAP5Q8WYK1 1306 aa15.87■□□□□ 0.13
SQSTM1-208ENST00000485412 TMEM62Q0P6H9 643 aa15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 ADAM15Q13444 863 aa15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 NECTIN1Q15223 517 aa15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 RTN4RL1Q86UN2 441 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 GIMAP8Q8ND71 665 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 GLG1Q92896 1179 aa15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 ZNF689Q96CS4 500 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 TMEM87BQ96K49 555 aa15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 JADE2Q9NQC1 790 aa15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 ERAP1Q9NZ08 941 aa15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 FNDC1Q4ZHG4 1894 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-208ENST00000485412 ARP10275 920 aa15.85■□□□□ 0.13
SQSTM1-208ENST00000485412 INSRRP14616 1297 aa15.85■□□□□ 0.13
SQSTM1-208ENST00000485412 CD52P31358 61 aa15.85■□□□□ 0.13
SQSTM1-208ENST00000485412 LIFRP42702 1097 aa15.85■□□□□ 0.13
SQSTM1-208ENST00000485412 GNAQP50148 359 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms