RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 SUV39H1O43463 412 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 FSHBP01225 129 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 GLI4P10075 376 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 PMS1P54277 932 aaKnown RBP5.46□□□□□ -1.54
SPTA1-206ENST00000484520 RBM6P78332 1123 aaKnown RBP5.46□□□□□ -1.54
SPTA1-206ENST00000484520 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 C1orf141Q5JVX7 400 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 AXDND1Q5T1B0 1012 aaPredicted RBP5.46□□□□□ -1.54
SPTA1-206ENST00000484520 CPZQ66K79 652 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 INTS3Q68E01 1043 aaKnown RBP5.46□□□□□ -1.54
SPTA1-206ENST00000484520 PPFIBP1Q86W92 1011 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 ZNF761Q86XN6 746 aaPredicted RBP5.46□□□□□ -1.54
SPTA1-206ENST00000484520 SLITRK4Q8IW52 837 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 FIBCD1Q8N539 461 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 RGS22Q8NE09 1264 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 SMARCC2Q8TAQ2 1214 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 CHMP4BQ9H444 224 aaKnown RBP5.46□□□□□ -1.54
SPTA1-206ENST00000484520 SPATA6Q9NWH7 488 aaPredicted RBP5.46□□□□□ -1.54
SPTA1-206ENST00000484520 NTMQ9P121 344 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 XIRP1Q702N8 1843 aaKnown RBP5.46□□□□□ -1.54
SPTA1-206ENST00000484520 WDR17Q8IZU2 1322 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 KIF16BQ96L93 1317 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 MARF1Q9Y4F3 1742 aaKnown RBP5.45□□□□□ -1.54
SPTA1-206ENST00000484520 COL22A1Q8NFW1 1626 aaPredicted RBP5.45□□□□□ -1.54
SPTA1-206ENST00000484520 IPO8O15397 1037 aaKnown RBP5.45□□□□□ -1.54
SPTA1-206ENST00000484520 TP53P04637 393 aaPredicted RBP5.45□□□□□ -1.54
SPTA1-206ENST00000484520 CD3EP07766 207 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 RRP1P56182 461 aaKnown RBP5.45□□□□□ -1.54
SPTA1-206ENST00000484520 ALDH1L2Q3SY69 923 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 SLC16A11Q8NCK7 471 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 SMARCC1Q92922 1105 aaPredicted RBP5.45□□□□□ -1.54
SPTA1-206ENST00000484520 TSPAN17Q96FV3 270 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 LOXL4Q96JB6 756 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 C8orf49Q96NF6 230 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 NT5C1AQ9BXI3 368 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 FAM86C1Q9NVL1 165 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 FHOD1Q9Y613 1164 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 AFF2P51816 1311 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 FANCIQ9NVI1 1328 aa5.45□□□□□ -1.54
SPTA1-206ENST00000484520 ROBO1Q9Y6N7 1651 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 CAMTA1Q9Y6Y1 1673 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 MAP2P11137 1827 aaKnown RBP5.44□□□□□ -1.54
SPTA1-206ENST00000484520 HOXB7P09629 217 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 ZNF853P0CG23 659 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 ZNF20P17024 532 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 CD247P20963 164 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 ZC3H6P61129 1189 aaKnown RBP5.44□□□□□ -1.54
SPTA1-206ENST00000484520 NBPF6Q5VWK0 638 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 TTLL7Q6ZT98 887 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 HS2ST1Q7LGA3 356 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 CABP7Q86V35 215 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 ZBTB8AQ96BR9 441 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 LTV1Q96GA3 475 aaPredicted RBP5.44□□□□□ -1.54
SPTA1-206ENST00000484520 PHACTR3Q96KR7 559 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 NBPF4Q96M43 638 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 NOL6Q9H6R4 1146 aaKnown RBP5.44□□□□□ -1.54
SPTA1-206ENST00000484520 SRRDQ9UH36 339 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 THRAP3Q9Y2W1 955 aaKnown RBP5.44□□□□□ -1.54
SPTA1-206ENST00000484520 RRP7AQ9Y3A4 280 aaKnown RBP5.44□□□□□ -1.54
SPTA1-206ENST00000484520 SF3B6Q9Y3B4 125 aaKnown RBP5.44□□□□□ -1.54
SPTA1-206ENST00000484520 RWDD3Q9Y3V2 267 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 ZNF451Q9Y4E5 1061 aa5.44□□□□□ -1.54
SPTA1-206ENST00000484520 COL5A2P05997 1499 aaPredicted RBP5.44□□□□□ -1.54
SPTA1-206ENST00000484520 LMO7Q8WWI1 1683 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 CEMIPQ8WUJ3 1361 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 CRB1P82279 1406 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 ZBTB7CA1YPR0 619 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 C1QTNF3-AMACRE9PGA6 284 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 CHL1O00533 1208 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 CANXP27824 592 aaKnown RBP5.43□□□□□ -1.54
SPTA1-206ENST00000484520 EVA1CP58658 441 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 POU4F1Q01851 419 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 CACNB2Q08289 660 aaPredicted RBP5.43□□□□□ -1.54
SPTA1-206ENST00000484520 SMAD4Q13485 552 aaKnown RBP5.43□□□□□ -1.54
SPTA1-206ENST00000484520 MTHFSDQ2M296 383 aaKnown RBP5.43□□□□□ -1.54
SPTA1-206ENST00000484520 TBC1D10BQ4KMP7 808 aaPredicted RBP5.43□□□□□ -1.54
SPTA1-206ENST00000484520 ADAMTS17Q8TE56 1095 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 DDX11Q96FC9 970 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 ZDHHC15Q96MV8 337 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 SAMD11Q96NU1 681 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 C1QTNF3Q9BXJ4 246 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 FBLN5Q9UBX5 448 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 ZNRF3Q9ULT6 936 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 PCDH11XQ9BZA7 1347 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 PCDH11YQ9BZA8 1340 aa5.43□□□□□ -1.54
SPTA1-206ENST00000484520 LTN1O94822 1766 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 LRP6O75581 1613 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 PLATP00750 562 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 ITGA4P13612 1032 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 IL2RBP14784 551 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 RARSP54136 660 aaKnown RBP5.42□□□□□ -1.54
SPTA1-206ENST00000484520 TEFQ10587 303 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 TAF7Q15545 349 aaPredicted RBP5.42□□□□□ -1.54
SPTA1-206ENST00000484520 ZNF530Q6P9A1 599 aaPredicted RBP5.42□□□□□ -1.54
SPTA1-206ENST00000484520 TOM1L2Q6ZVM7 507 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 IFNL2Q8IZJ0 200 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 LZTR1Q8N653 840 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 TTC9BQ8N6N2 239 aa5.42□□□□□ -1.54
SPTA1-206ENST00000484520 CPA5Q8WXQ8 436 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms