RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 TRIM55Q9BYV6 548 aa7.02□□□□□ -1.29
SCAF11-207ENST00000484275 SRPK3Q9UPE1 567 aa7.02□□□□□ -1.29
SCAF11-207ENST00000484275 PCDHA8Q9Y5H6 950 aa7.02□□□□□ -1.29
SCAF11-207ENST00000484275 WNT9AO14904 365 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 PDPK1O15530 556 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 PTPN1P18031 435 aaKnown RBP7.01□□□□□ -1.29
SCAF11-207ENST00000484275 RBM25P49756 843 aaKnown RBP7.01□□□□□ -1.29
SCAF11-207ENST00000484275 PAK1Q13153 545 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 BTBD8Q5XKL5 378 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 ARHGAP36Q6ZRI8 547 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 REXO1L1PQ8IX06 675 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 PCDH19Q8TAB3 1148 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 LRRC37BQ96QE4 947 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 LMF1Q96S06 567 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 PFDN2Q9UHV9 154 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 TCAF1Q9Y4C2 921 aa7.01□□□□□ -1.29
SCAF11-207ENST00000484275 MAN2B1O00754 1011 aa7□□□□□ -1.29
SCAF11-207ENST00000484275 DIAPH1O60610 1272 aaKnown RBP7□□□□□ -1.29
SCAF11-207ENST00000484275 AMHP03971 560 aa7□□□□□ -1.29
SCAF11-207ENST00000484275 MAMDC2Q7Z304 686 aaPredicted RBP7□□□□□ -1.29
SCAF11-207ENST00000484275 OSTM1Q86WC4 334 aa7□□□□□ -1.29
SCAF11-207ENST00000484275 SCUBE1Q8IWY4 988 aa7□□□□□ -1.29
SCAF11-207ENST00000484275 SORCS2Q96PQ0 1159 aa7□□□□□ -1.29
SCAF11-207ENST00000484275 SRRDQ9UH36 339 aa7□□□□□ -1.29
SCAF11-207ENST00000484275 CBLCQ9ULV8 474 aa7□□□□□ -1.29
SCAF11-207ENST00000484275 ESYT3A0FGR9 886 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 ARVCFO00192 962 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 AQP7O14520 342 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 MUSKO15146 869 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 SLPIP03973 132 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 PYGMP11217 842 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 PDE6AP16499 860 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 POLD1P28340 1107 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 ACVRL1P37023 503 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 TOP3AQ13472 1001 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-207ENST00000484275 RASGRF1Q13972 1273 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 USP10Q14694 798 aaKnown RBP6.99□□□□□ -1.29
SCAF11-207ENST00000484275 GPR19Q15760 415 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 DPH6Q7L8W6 267 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 MTDHQ86UE4 582 aaKnown RBP6.99□□□□□ -1.29
SCAF11-207ENST00000484275 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
SCAF11-207ENST00000484275 PTPRN2Q92932 1015 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 EXOC2Q96KP1 924 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 VPS11Q9H270 941 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 RIC8BQ9NVN3 520 aa6.99□□□□□ -1.29
SCAF11-207ENST00000484275 TRBV23-1A0A0A0MS06 115 aa6.98□□□□□ -1.29
SCAF11-207ENST00000484275 STK10O94804 968 aaKnown RBP6.98□□□□□ -1.29
SCAF11-207ENST00000484275 JAM2P57087 298 aa6.98□□□□□ -1.29
SCAF11-207ENST00000484275 NOLC1Q14978 699 aaKnown RBP eCLIP6.98□□□□□ -1.29
SCAF11-207ENST00000484275 RNF151Q2KHN1 245 aa6.98□□□□□ -1.29
SCAF11-207ENST00000484275 MTERF2Q49AM1 385 aa6.98□□□□□ -1.29
SCAF11-207ENST00000484275 TAX1BP1Q86VP1 789 aa6.98□□□□□ -1.29
SCAF11-207ENST00000484275 IFNL2Q8IZJ0 200 aa6.98□□□□□ -1.29
SCAF11-207ENST00000484275 ZBTB38Q8NAP3 1195 aaPredicted RBP6.98□□□□□ -1.29
SCAF11-207ENST00000484275 FBXW5Q969U6 566 aa6.98□□□□□ -1.29
SCAF11-207ENST00000484275 NEIL1Q96FI4 390 aaPredicted RBP6.98□□□□□ -1.29
SCAF11-207ENST00000484275 CARD11Q9BXL7 1154 aa6.98□□□□□ -1.29
SCAF11-207ENST00000484275 ZFR2Q9UPR6 939 aaKnown RBP6.98□□□□□ -1.29
SCAF11-207ENST00000484275 TESMINQ9Y4I5 508 aa6.98□□□□□ -1.29
SCAF11-207ENST00000484275 CCDC85CA6NKD9 419 aa6.97□□□□□ -1.29
SCAF11-207ENST00000484275 KCNK3O14649 394 aa6.97□□□□□ -1.29
SCAF11-207ENST00000484275 C4BPAP04003 597 aaKnown RBP6.97□□□□□ -1.29
SCAF11-207ENST00000484275 KRT15P19012 456 aa6.97□□□□□ -1.29
SCAF11-207ENST00000484275 SSRP1Q08945 709 aaKnown RBP6.97□□□□□ -1.29
SCAF11-207ENST00000484275 SEC23AQ15436 765 aa6.97□□□□□ -1.29
SCAF11-207ENST00000484275 ZFPM1Q8IX07 1006 aa6.97□□□□□ -1.29
SCAF11-207ENST00000484275 CKAP2LQ8IYA6 745 aa6.97□□□□□ -1.29
SCAF11-207ENST00000484275 NLGN4XQ8N0W4 816 aa6.97□□□□□ -1.29
SCAF11-207ENST00000484275 CDC6Q99741 560 aa6.97□□□□□ -1.29
SCAF11-207ENST00000484275 CATSPERZQ9NTU4 200 aa6.97□□□□□ -1.29
SCAF11-207ENST00000484275 ZNF561-AS1K7EIQ3 104 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 FAM153BP0C7A2 387 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 SRGAP2CP0DJJ0 459 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 MC4RP32245 332 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
SCAF11-207ENST00000484275 IL13RA1P78552 427 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 GUCY1A3Q02108 690 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 FIGNQ5HY92 759 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 C16orf59Q7L2K0 433 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 CCDC113Q9H0I3 377 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 SEMA4AQ9H3S1 761 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 SMURF1Q9HCE7 757 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 BTBD7Q9P203 1132 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 PCDHA9Q9Y5H5 950 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 ATP23Q9Y6H3 246 aa6.96□□□□□ -1.3
SCAF11-207ENST00000484275 MATN2O00339 956 aa6.95□□□□□ -1.3
SCAF11-207ENST00000484275 GDF5P43026 501 aa6.95□□□□□ -1.3
SCAF11-207ENST00000484275 RRADP55042 308 aa6.95□□□□□ -1.3
SCAF11-207ENST00000484275 NAALADL2Q58DX5 795 aa6.95□□□□□ -1.3
SCAF11-207ENST00000484275 FSTL4Q6MZW2 842 aa6.95□□□□□ -1.3
SCAF11-207ENST00000484275 FUKQ8N0W3 1084 aa6.95□□□□□ -1.3
SCAF11-207ENST00000484275 GIMAP8Q8ND71 665 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-207ENST00000484275 ARHGAP28Q9P2N2 729 aa6.95□□□□□ -1.3
SCAF11-207ENST00000484275 U2SURPO15042 1029 aaKnown RBP6.94□□□□□ -1.3
SCAF11-207ENST00000484275 CUTAO60888 179 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 CRTAMO95727 393 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 MPIG6BO95866 241 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 PTGS1P23219 599 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 AOAHP28039 575 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 ADCY8P40145 1251 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms