RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SP2Q02086 613 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 SP4Q02446 784 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 MCF2L2Q86YR7 1114 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 ZNF713Q8N859 430 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-216ENST00000484087 RNF214Q8ND24 703 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 DNERQ8NFT8 737 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 NSUN6Q8TEA1 469 aaKnown RBP7.83□□□□□ -1.16
BRCA1-216ENST00000484087 BADQ92934 168 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 LRCH3Q96II8 777 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 GDF15Q99988 308 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 PANK2Q9BZ23 570 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 PPP1R12CQ9BZL4 782 aa7.83□□□□□ -1.16
BRCA1-216ENST00000484087 A0A1B0GVL5 298 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 RBM47A0AV96 593 aaKnown RBP7.82□□□□□ -1.16
BRCA1-216ENST00000484087 CLTBP09497 229 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 ATP2B1P20020 1258 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 MARCKSP29966 332 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-216ENST00000484087 GNA11P29992 359 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 SYKP43405 635 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 FXR1P51114 621 aaKnown RBP eCLIP7.82□□□□□ -1.16
BRCA1-216ENST00000484087 EPHB4P54760 987 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 NAPAP54920 295 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 GHRHRQ02643 423 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 TYRO3Q06418 890 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 ARHGAP1Q07960 439 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 FAAP100Q0VG06 881 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 SEMA3FQ13275 785 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 NR5A1Q13285 461 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 STXBP2Q15833 593 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 PPP1R15BQ5SWA1 713 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 C9orf50Q5SZB4 431 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 IQSEC1Q6DN90 963 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 CCDC62Q6P9F0 684 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 RBM43Q6ZSC3 357 aaKnown RBP7.82□□□□□ -1.16
BRCA1-216ENST00000484087 CKAP2LQ8IYA6 745 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 BLIDQ8IZY5 108 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 RASGRP4Q8TDF6 673 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 SCFD2Q8WU76 684 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 AFG1LQ8WV93 481 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 GLT1D1Q96MS3 346 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 TIGD1Q96MW7 591 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 FUCA2Q9BTY2 467 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 AP5M1Q9H0R1 490 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 TRPV6Q9H1D0 765 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 SPC25Q9HBM1 224 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 TRMT13Q9NUP7 481 aaKnown RBP7.82□□□□□ -1.16
BRCA1-216ENST00000484087 PCDHA4Q9UN74 947 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 MRVI1Q9Y6F6 885 aa7.82□□□□□ -1.16
BRCA1-216ENST00000484087 MORC2Q9Y6X9 1032 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-216ENST00000484087 CCDC194A0A1B0GVG4 234 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 MOXD2PA6NHM9 499 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 STXBP3O00186 592 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 B4GALT4O60513 344 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 GGPS1O95749 300 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 MMP3P08254 477 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 UBA1P22314 1058 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 NDUFA8P51970 172 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PURAQ00577 322 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 SNW1Q13573 536 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 ITGA7Q13683 1181 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PTPAQ15257 358 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 FAM47CQ5HY64 1035 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 AXDND1Q5T1B0 1012 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 FAM126BQ8IXS8 530 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 FMR1NBQ8N0W7 255 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 ENGASEQ8NFI3 743 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 FAM200AQ8TCP9 573 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 TSEN34Q9BSV6 310 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 UBE2OQ9C0C9 1292 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 NAT10Q9H0A0 1025 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 GOLPH3LQ9H4A5 285 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 C6orf50Q9HD87 102 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 ANO10Q9NW15 660 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 BARHL2Q9NY43 387 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 DDX41Q9UJV9 622 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 FRMPD4Q14CM0 1322 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 SIP14410 1827 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 A0A0U1RQG5 324 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 ARVCFO00192 962 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 ZNF202O95125 648 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 CYP2C9P11712 490 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PFKFB1P16118 471 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 CYP2C18P33260 490 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 TOB1P50616 345 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 STX1AQ16623 288 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 HSDL1Q3SXM5 330 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 TTC38Q5R3I4 469 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 RESP18Q5W5W9 173 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PIK3AP1Q6ZUJ8 805 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 VSIG10LQ86VR7 867 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 TRIM50Q86XT4 487 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PCSK9Q8NBP7 692 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 DAGLBQ8NCG7 672 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 CYP2W1Q8TAV3 490 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 OXER1Q8TDS5 423 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PPP1R9BQ96SB3 815 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PYM1Q9BRP8 204 aaKnown RBP7.81□□□□□ -1.16
BRCA1-216ENST00000484087 KDM4CQ9H3R0 1056 aa7.81□□□□□ -1.16
BRCA1-216ENST00000484087 PSTPIP2Q9H939 334 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms