RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 CSF2RAP15509 400 aa29.19■■■□□ 2.26
PDCD4-208ENST00000483670 JAK3P52333 1124 aa29.19■■■□□ 2.26
PDCD4-208ENST00000483670 PSRC1Q6PGN9 363 aaPredicted RBP29.19■■■□□ 2.26
PDCD4-208ENST00000483670 SERINC5Q86VE9 423 aa29.19■■■□□ 2.26
PDCD4-208ENST00000483670 RDM1Q8NG50 284 aa29.19■■■□□ 2.26
PDCD4-208ENST00000483670 WNT8AQ9H1J5 351 aa29.19■■■□□ 2.26
PDCD4-208ENST00000483670 IL23AQ9NPF7 189 aa29.19■■■□□ 2.26
PDCD4-208ENST00000483670 ZNF302Q9NR11 478 aa29.19■■■□□ 2.26
PDCD4-208ENST00000483670 TANC1Q9C0D5 1861 aa29.19■■■□□ 2.26
PDCD4-208ENST00000483670 UMODL1Q5DID0 1318 aa29.19■■■□□ 2.26
PDCD4-208ENST00000483670 RRN3P2A6NIE6 340 aa29.18■■■□□ 2.26
PDCD4-208ENST00000483670 CCL23P55773 120 aa29.18■■■□□ 2.26
PDCD4-208ENST00000483670 PPFIA1Q13136 1202 aa29.18■■■□□ 2.26
PDCD4-208ENST00000483670 LRIT3Q3SXY7 679 aa29.18■■■□□ 2.26
PDCD4-208ENST00000483670 ETNPPLQ8TBG4 499 aa29.18■■■□□ 2.26
PDCD4-208ENST00000483670 SETD4Q9NVD3 440 aa29.18■■■□□ 2.26
PDCD4-208ENST00000483670 PCDH10Q9P2E7 1040 aa29.18■■■□□ 2.26
PDCD4-208ENST00000483670 SAMM50Q9Y512 469 aa29.18■■■□□ 2.26
PDCD4-208ENST00000483670 MYH9P35579 1960 aaKnown RBP29.18■■■□□ 2.26
PDCD4-208ENST00000483670 CAND2O75155 1236 aa29.17■■■□□ 2.26
PDCD4-208ENST00000483670 PSMD10O75832 226 aa29.17■■■□□ 2.26
PDCD4-208ENST00000483670 RPLP2P05387 115 aaKnown RBP29.17■■■□□ 2.26
PDCD4-208ENST00000483670 MARK3P27448 753 aa29.17■■■□□ 2.26
PDCD4-208ENST00000483670 GNL2Q13823 731 aaKnown RBP29.17■■■□□ 2.26
PDCD4-208ENST00000483670 EARS2Q5JPH6 523 aaKnown RBP29.17■■■□□ 2.26
PDCD4-208ENST00000483670 LMBR1Q8WVP7 490 aa29.17■■■□□ 2.26
PDCD4-208ENST00000483670 KCNMB3Q9NPA1 279 aa29.17■■■□□ 2.26
PDCD4-208ENST00000483670 IQCF3P0C7M6 154 aa29.16■■■□□ 2.26
PDCD4-208ENST00000483670 SELPP16109 830 aa29.16■■■□□ 2.26
PDCD4-208ENST00000483670 ADAM17P78536 824 aa29.16■■■□□ 2.26
PDCD4-208ENST00000483670 GUCY1B3Q02153 619 aa29.16■■■□□ 2.26
PDCD4-208ENST00000483670 CCDC60Q8IWA6 550 aaPredicted RBP29.16■■■□□ 2.26
PDCD4-208ENST00000483670 UIMC1Q96RL1 719 aa29.16■■■□□ 2.26
PDCD4-208ENST00000483670 DISC1Q9NRI5 854 aa29.16■■■□□ 2.26
PDCD4-208ENST00000483670 TRPC6Q9Y210 931 aa29.16■■■□□ 2.26
PDCD4-208ENST00000483670 SLC37A4O43826 429 aa29.15■■■□□ 2.26
PDCD4-208ENST00000483670 ZNF200P98182 395 aaPredicted RBP29.15■■■□□ 2.26
PDCD4-208ENST00000483670 PLCB4Q15147 1175 aa29.15■■■□□ 2.26
PDCD4-208ENST00000483670 GRIK4Q16099 956 aa29.15■■■□□ 2.26
PDCD4-208ENST00000483670 SWSAP1Q6NVH7 229 aa29.15■■■□□ 2.26
PDCD4-208ENST00000483670 TAF2Q6P1X5 1199 aa29.15■■■□□ 2.26
PDCD4-208ENST00000483670 PDXDC2PQ6P474 469 aa29.15■■■□□ 2.26
PDCD4-208ENST00000483670 SLFN12Q8IYM2 578 aa29.15■■■□□ 2.26
PDCD4-208ENST00000483670 DHX38Q92620 1227 aaKnown RBP29.15■■■□□ 2.26
PDCD4-208ENST00000483670 SMC3Q9UQE7 1217 aa29.15■■■□□ 2.26
PDCD4-208ENST00000483670 MAFBQ9Y5Q3 323 aaPredicted RBP29.15■■■□□ 2.26
PDCD4-208ENST00000483670 POTEB3A0JP26 581 aa29.14■■■□□ 2.26
PDCD4-208ENST00000483670 TREHO43280 583 aa29.14■■■□□ 2.26
PDCD4-208ENST00000483670 MARCH6O60337 910 aa29.14■■■□□ 2.26
PDCD4-208ENST00000483670 BAG4O95429 457 aaKnown RBP29.14■■■□□ 2.26
PDCD4-208ENST00000483670 CKBP12277 381 aa29.14■■■□□ 2.26
PDCD4-208ENST00000483670 HIC1Q14526 733 aa29.14■■■□□ 2.26
PDCD4-208ENST00000483670 SHHQ15465 462 aa29.14■■■□□ 2.26
PDCD4-208ENST00000483670 POTEBQ6S5H4 581 aa29.14■■■□□ 2.26
PDCD4-208ENST00000483670 LRRC8DQ7L1W4 858 aa29.14■■■□□ 2.26
PDCD4-208ENST00000483670 ATP8B4Q8TF62 1192 aa29.14■■■□□ 2.26
PDCD4-208ENST00000483670 MTIF3Q9H2K0 278 aaKnown RBP29.14■■■□□ 2.26
PDCD4-208ENST00000483670 FAM205CA6NFA0 338 aa29.13■■■□□ 2.25
PDCD4-208ENST00000483670 HBP1O60381 514 aa29.13■■■□□ 2.25
PDCD4-208ENST00000483670 EPHB4P54760 987 aa29.13■■■□□ 2.25
PDCD4-208ENST00000483670 ORC2Q13416 577 aaPredicted RBP29.13■■■□□ 2.25
PDCD4-208ENST00000483670 SCLYQ96I15 445 aa29.13■■■□□ 2.25
PDCD4-208ENST00000483670 FAM167AQ96KS9 214 aa29.13■■■□□ 2.25
PDCD4-208ENST00000483670 UNC45AQ9H3U1 944 aa29.13■■■□□ 2.25
PDCD4-208ENST00000483670 TUBE1Q9UJT0 475 aa29.13■■■□□ 2.25
PDCD4-208ENST00000483670 WDR81Q562E7 1941 aa29.13■■■□□ 2.25
PDCD4-208ENST00000483670 COL1A2P08123 1366 aa29.13■■■□□ 2.25
PDCD4-208ENST00000483670 MBLAC1A4D2B0 266 aaPredicted RBP29.12■■■□□ 2.25
PDCD4-208ENST00000483670 INSRRP14616 1297 aa29.12■■■□□ 2.25
PDCD4-208ENST00000483670 GJB2P29033 226 aa29.12■■■□□ 2.25
PDCD4-208ENST00000483670 CUL4AQ13619 759 aa29.12■■■□□ 2.25
PDCD4-208ENST00000483670 TRIM71Q2Q1W2 868 aaKnown RBP29.12■■■□□ 2.25
PDCD4-208ENST00000483670 TMEM240Q5SV17 173 aa29.12■■■□□ 2.25
PDCD4-208ENST00000483670 C9orf50Q5SZB4 431 aa29.12■■■□□ 2.25
PDCD4-208ENST00000483670 B3GNT9Q6UX72 402 aa29.12■■■□□ 2.25
PDCD4-208ENST00000483670 MIER3Q7Z3K6 550 aa29.12■■■□□ 2.25
PDCD4-208ENST00000483670 NOSTRINQ8IVI9 506 aa29.12■■■□□ 2.25
PDCD4-208ENST00000483670 BBXQ8WY36 941 aaPredicted RBP29.12■■■□□ 2.25
PDCD4-208ENST00000483670 RNPC3Q96LT9 517 aaKnown RBP29.12■■■□□ 2.25
PDCD4-208ENST00000483670 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.12■■■□□ 2.25
PDCD4-208ENST00000483670 IGSF9BQ9UPX0 1349 aa29.12■■■□□ 2.25
PDCD4-208ENST00000483670 CHMP2AO43633 222 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 FGBP02675 491 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 THPOP40225 353 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 TRAPPC10P48553 1259 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 PPP2R5CQ13362 524 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 RPAINQ86UA6 219 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 RSPH3Q86UC2 560 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 CKAP2LQ8IYA6 745 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 GABBR1Q9UBS5 961 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 CEP131Q9UPN4 1083 aa29.11■■■□□ 2.25
PDCD4-208ENST00000483670 NEMFO60524 1076 aa29.1■■■□□ 2.25
PDCD4-208ENST00000483670 U2AF2P26368 475 aaKnown RBP eCLIP29.1■■■□□ 2.252e-6■■■□□ 14.6
PDCD4-208ENST00000483670 ZNF484Q5JVG2 852 aa29.1■■■□□ 2.25
PDCD4-208ENST00000483670 ZNF365Q70YC5 407 aa29.1■■■□□ 2.25
PDCD4-208ENST00000483670 C16orf59Q7L2K0 433 aa29.1■■■□□ 2.25
PDCD4-208ENST00000483670 POTEDQ86YR6 584 aa29.1■■■□□ 2.25
PDCD4-208ENST00000483670 NOL7Q9UMY1 257 aaKnown RBP29.1■■■□□ 2.25
PDCD4-208ENST00000483670 ACRP10323 421 aa29.09■■■□□ 2.25
PDCD4-208ENST00000483670 ACTN1P12814 892 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms