RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 SCFD1Q8WVM8 642 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 ZKSCAN4Q969J2 545 aaPredicted RBP13.18□□□□□ -0.3
SND1-210ENST00000483503 ATG4CQ96DT6 458 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 MAP7D2Q96T17 732 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 TIPINQ9BVW5 301 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
SND1-210ENST00000483503 KCTD10Q9H3F6 313 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 ZSWIM4Q9H7M6 989 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 AGO4Q9HCK5 861 aaKnown RBP13.18□□□□□ -0.3
SND1-210ENST00000483503 KCNH7Q9NS40 1196 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 RNF146Q9NTX7 359 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 RGL1Q9NZL6 768 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 TBC1D7Q9P0N9 293 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 ADAMTS5Q9UNA0 930 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 TRAF3IP3Q9Y228 551 aa13.18□□□□□ -0.3
SND1-210ENST00000483503 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 KIF5CO60282 957 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 STAM2O75886 525 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 LYPLA2O95372 231 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 ITGB5P18084 799 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 CASQ1P31415 396 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 SFNP31947 248 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 HMGCS2P54868 508 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 RPS6P62753 249 aaKnown RBP13.17□□□□□ -0.3
SND1-210ENST00000483503 KRT83P78385 493 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 MAP3K9P80192 1104 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 KRT76Q01546 638 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 RAD51AP2Q09MP3 1159 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 ADAM9Q13443 819 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 MTMR1Q13613 665 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 TUBB2AQ13885 445 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 PGM5Q15124 567 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 MEA1Q16626 185 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 TRIM65Q6PJ69 517 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 RAD9BQ6WBX8 426 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 C1orf186Q6ZWK4 172 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 FRMD5Q7Z6J6 570 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 NELFCDQ8IXH7 590 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 CCDC170Q8IYT3 715 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.17□□□□□ -0.33e-6■■■■□ 21.3
SND1-210ENST00000483503 DCPSQ96C86 337 aaKnown RBP13.17□□□□□ -0.3
SND1-210ENST00000483503 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 TAAR1Q96RJ0 339 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 RMDN3Q96TC7 470 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 TUBB2BQ9BVA1 445 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 TTYH3Q9C0H2 523 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 MRPL44Q9H9J2 332 aaKnown RBP13.17□□□□□ -0.3
SND1-210ENST00000483503 PARVGQ9HBI0 331 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 METTL14Q9HCE5 456 aaKnown RBP13.17□□□□□ -0.3
SND1-210ENST00000483503 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 TYW1Q9NV66 732 aaKnown RBP13.17□□□□□ -0.3
SND1-210ENST00000483503 COL20A1Q9P218 1284 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 MYO1AQ9UBC5 1043 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
SND1-210ENST00000483503 AFG3L2Q9Y4W6 797 aa13.17□□□□□ -0.3
SND1-210ENST00000483503 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 SLC16A3O15427 465 aaKnown RBP13.16□□□□□ -0.3
SND1-210ENST00000483503 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
SND1-210ENST00000483503 DKC1O60832 514 aaKnown RBP eCLIP13.16□□□□□ -0.3
SND1-210ENST00000483503 IPO7O95373 1038 aaKnown RBP13.16□□□□□ -0.3
SND1-210ENST00000483503 SLU7O95391 586 aaKnown RBP13.16□□□□□ -0.3
SND1-210ENST00000483503 EIF2AK2P19525 551 aaKnown RBP13.16□□□□□ -0.3
SND1-210ENST00000483503 HIRAP54198 1017 aaPredicted RBP13.16□□□□□ -0.3
SND1-210ENST00000483503 GNG11P61952 73 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
SND1-210ENST00000483503 ALCAMQ13740 583 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 NFIL3Q16649 462 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 ARHGAP29Q52LW3 1261 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
SND1-210ENST00000483503 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 MYCT1Q8N699 235 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 REPS2Q8NFH8 660 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 NEK11Q8NG66 645 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 GOLGA5Q8TBA6 731 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 GPRASP2Q96D09 838 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 PDCD2LQ9BRP1 358 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 LXNQ9BS40 222 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 RUSC1Q9BVN2 902 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 ACAD9Q9H845 621 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 L2HGDHQ9H9P8 463 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 SIK3Q9Y2K2 1263 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
SND1-210ENST00000483503 CSADQ9Y600 493 aa13.16□□□□□ -0.3
SND1-210ENST00000483503 EPN1Q9Y6I3 576 aaPredicted RBP13.16□□□□□ -0.3
SND1-210ENST00000483503 DHX15O43143 795 aaKnown RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 USP2O75604 605 aaPredicted RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 GCNT3O95395 438 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 MAPTP10636 758 aaKnown RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 MYCLP12524 364 aaPredicted RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 HNRNPH3P31942 346 aaKnown RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 NF2P35240 595 aa13.15□□□□□ -0.3
SND1-210ENST00000483503 QARSP47897 775 aaKnown RBP13.15□□□□□ -0.3
SND1-210ENST00000483503 IREB2P48200 963 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms