RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
COL4A5-205ENST00000483338 ECHS1P30084 290 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 FLT3P36888 993 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 ARPC4P59998 168 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 DMPKQ09013 629 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 CERKQ8TCT0 537 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 MPP4Q96JB8 637 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 ECHDC1Q9NTX5 307 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 PAG1Q9NWQ8 432 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 PNMA2Q9UL42 364 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 XRN1Q8IZH2 1706 aaKnown RBP8.5□□□□□ -1.05
COL4A5-205ENST00000483338 ACTN4O43707 911 aaKnown RBP8.5□□□□□ -1.05
COL4A5-205ENST00000483338 TAF5LO75529 589 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 COL6A2P12110 1019 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 SKIP12755 728 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 SERPINB3P29508 390 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 PTPAQ15257 358 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL4A5-205ENST00000483338 FAM13CQ8NE31 585 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 DQX1Q8TE96 717 aaKnown RBP8.5□□□□□ -1.05
COL4A5-205ENST00000483338 NAT14Q8WUY8 206 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 IRGQQ8WZA9 623 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 TLCD1Q96CP7 247 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 ETNK1Q9HBU6 452 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 TBC1D30Q9Y2I9 924 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 TULP4Q9NRJ4 1543 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 MROH7Q68CQ1 1323 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 NCK2O43639 380 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 LYNP07948 512 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 VAV1P15498 845 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 EMP3P54852 163 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 CYP27A1Q02318 531 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 RASSF7Q02833 373 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 FOXD4Q12950 439 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 MAP7Q14244 749 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 KRT72Q14CN4 511 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 KRT31Q15323 416 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 TREML1Q86YW5 311 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 RIBC1Q8N443 379 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 SCG3Q8WXD2 468 aaKnown RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 BHMTQ93088 406 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 IQCDQ96DY2 449 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 MAML3Q96JK9 1138 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 RAB3IPQ96QF0 476 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 VPS16Q9H269 839 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 DPH5Q9H2P9 285 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 ADAM7Q9H2U9 754 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 ZNF148Q9UQR1 794 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 HYOU1Q9Y4L1 999 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 TECPR2O15040 1411 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 COL15A1P39059 1388 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 RFX7Q2KHR2 1363 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 PPP6R2O75170 966 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 UBTFL1P0CB47 393 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 PLCG2P16885 1265 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 TCP1P17987 556 aaKnown RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 VHLP40337 213 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 PAFAH1B1P43034 410 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 TRIM14Q14142 442 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 STOX1Q6ZVD7 989 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 BRINP3Q76B58 766 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 NRG4Q8WWG1 115 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 TUBGCP5Q96RT8 1024 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 DNAJC7Q99615 494 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 PRMT1Q99873 361 aaKnown RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 USP15Q9Y4E8 981 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 WDR46O15213 610 aaKnown RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 COBLO75128 1261 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 ENTPD5O75356 428 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 SERPINB7O75635 380 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 CYP21A2P08686 494 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 RXRBP28702 533 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 PMS2P54278 862 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 SH3BGRP55822 239 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 OCRLQ01968 901 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 KIF23Q02241 960 aaPredicted RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 NEPROQ6NW34 567 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 SLC43A3Q8NBI5 491 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 HNRNPABQ99729 332 aaKnown RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 MLXIPQ9HAP2 919 aa8.49□□□□□ -1.05
COL4A5-205ENST00000483338 TLR7Q9NYK1 1049 aaKnown RBP8.49□□□□□ -1.05
COL4A5-205ENST00000483338 NPHP3-ACAD11A0A0J9YXS1 232 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 TMEM110-MUSTN1A8MSY1 372 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 BIRC5O15392 142 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 TPPPO94811 219 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 AFPP02771 609 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 PDIA3P30101 505 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 TCF7P36402 384 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 PSMC1P62191 440 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 KRT71Q3SY84 523 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 CERKLQ49MI3 558 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 EAPPQ56P03 285 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 ANKLE1Q8NAG6 615 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 SREK1Q8WXA9 508 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 CENPKQ9BS16 269 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 ZNF330Q9Y3S2 320 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 KANSL1LA0AUZ9 987 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 HIP1O00291 1037 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 HGSO14964 777 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 SEMA3EO15041 775 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms