RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 NBPF8Q3BBV2 869 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 ANO6Q4KMQ2 910 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 CCDC158Q5M9N0 1113 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 CC2D1BQ5T0F9 858 aaKnown RBP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 CEP135Q66GS9 1140 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 GTF2IRD2BQ6EKJ0 949 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 HIBCHQ6NVY1 386 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 FRMD7Q6ZUT3 714 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 USP45Q70EL2 814 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 UBE2Q1Q7Z7E8 422 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 DAAM2Q86T65 1068 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 GTF2IRD2Q86UP8 949 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 PPFIBP1Q86W92 1011 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 TMEM192Q8IY95 271 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 ARL6IP6Q8N6S5 226 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 C2orf69Q8N8R5 385 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 CENPIQ92674 756 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 ATP2A3Q93084 1043 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 ZNF622Q969S3 477 aaKnown RBP eCLIP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 ITPKCQ96DU7 683 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 CCDC34Q96HJ3 373 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 SPATA17Q96L03 361 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 TMEM120AQ9BXJ8 343 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 SEZ6LQ9BYH1 1024 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 GTPBP4Q9BZE4 634 aaKnown RBP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 DMRT3Q9NQL9 472 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 RNF112Q9ULX5 631 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 SOX13Q9UN79 622 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 SIK3Q9Y2K2 1263 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 TRAF6Q9Y4K3 522 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 SNX13Q9Y5W8 968 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 FSD2A1L4K1 749 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 PRAMEF27A3QJZ7 478 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 TRAF5O00463 557 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 DDX3XO00571 662 aaKnown RBP eCLIP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 CLGNO14967 610 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 SPINT1O43278 529 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 B3GALT2O43825 422 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 DNAJA2O60884 412 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 UBXN7O94888 489 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 ARIH2O95376 493 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 TBC1D8O95759 1140 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 SLFN14P0C7P3 912 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 IDEP14735 1019 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 KCNA6P17658 529 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 POLR2BP30876 1174 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 ECI1P42126 302 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 STAT1P42224 750 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 ZNF131P52739 623 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 SLC5A3P53794 718 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 CALD1Q05682 793 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 INPP5AQ14642 412 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 RILPL1Q5EBL4 403 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 FAM209BQ5JX69 171 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 APOA5Q6Q788 366 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 ZZZ3Q8IYH5 903 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 ZNF513Q8N8E2 541 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 ARL10Q8N8L6 244 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 TMEM145Q8NBT3 493 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 KCT2Q8NC54 265 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 LMBR1Q8WVP7 490 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 ZMAT2Q96NC0 199 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 PPP1R16BQ96T49 567 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 INSM2Q96T92 566 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 POP1Q99575 1024 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 BAG1Q99933 345 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 COL25A1Q9BXS0 654 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 PDGFDQ9GZP0 370 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 WNT10AQ9GZT5 417 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 IGFLR1Q9H665 355 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 ZWILCHQ9H900 591 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 PRDM6Q9NQX0 595 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 OLA1Q9NTK5 396 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 ANKEF1Q9NU02 776 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 DNAJC28Q9NX36 388 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 MARK1Q9P0L2 795 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 CGGBP1Q9UFW8 167 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 CDC23Q9UJX2 597 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 SYNPO2Q9UMS6 1093 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 SF3B6Q9Y3B4 125 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 PCDHA8Q9Y5H6 950 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 SNX5Q9Y5X3 404 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 GPR45Q9Y5Y3 372 aa5.89□□□□□ -1.47
R3HDM1-216ENST00000483065 A0A087X0M5 115 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 A0A1B0GX30 115 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 EYA2O00167 538 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 ATXN7O15265 892 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 TBX1O43435 398 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 F11P03951 625 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 RAC2P15153 192 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 ITIH2P19823 946 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 PDCP20941 246 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 GPR3P46089 330 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 CASP5P51878 434 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 AMPD2Q01433 879 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 SPEM2Q0P670 501 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 SPARCL1Q14515 664 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 PGS1Q32NB8 556 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 UAP1L1Q3KQV9 507 aa5.88□□□□□ -1.47
R3HDM1-216ENST00000483065 SLC35F1Q5T1Q4 408 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms