RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 CCDC146Q8IYE0 955 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 PJA1Q8NG27 643 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 OR6J1Q8NGC5 347 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 RSAD2Q8WXG1 361 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 CRELD1Q96HD1 420 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 NECTIN4Q96NY8 510 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 TEX13BQ9BXU2 312 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 CLMPQ9H6B4 373 aa7.92□□□□□ -1.14
CHD6-209ENST00000482596 HMGB1P09429 215 aaKnown RBP7.91□□□□□ -1.14
CHD6-209ENST00000482596 HOXB8P17481 243 aaPredicted RBP7.91□□□□□ -1.14
CHD6-209ENST00000482596 SLC19A1P41440 591 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 NOVA1P51513 510 aaKnown RBP7.91□□□□□ -1.14
CHD6-209ENST00000482596 GSTO1P78417 241 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 STPG1Q5TH74 334 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 SLC4A10Q6U841 1118 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 RNF19BQ6ZMZ0 732 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 ADGRA1Q86SQ6 560 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 CPXCR1Q8N123 301 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 ANKRD44Q8N8A2 993 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 ZNF513Q8N8E2 541 aaPredicted RBP7.91□□□□□ -1.14
CHD6-209ENST00000482596 ZNF689Q96CS4 500 aaPredicted RBP7.91□□□□□ -1.14
CHD6-209ENST00000482596 CDCA3Q99618 268 aaPredicted RBP7.91□□□□□ -1.14
CHD6-209ENST00000482596 ADAM7Q9H2U9 754 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 VCPKMTQ9H867 229 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 SLC24A3Q9HC58 644 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 AAASQ9NRG9 546 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 SERPINB13Q9UIV8 391 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 RAB23Q9ULC3 237 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 CACNA1FO60840 1977 aa7.91□□□□□ -1.14
CHD6-209ENST00000482596 FBN3Q75N90 2809 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 MYO5AQ9Y4I1 1855 aaKnown RBP7.9□□□□□ -1.14
CHD6-209ENST00000482596 IL16Q14005 1332 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 EMSYQ7Z589 1322 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 MPHOSPH10O00566 681 aaKnown RBP7.9□□□□□ -1.14
CHD6-209ENST00000482596 HOXA2O43364 376 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 NTRK1P04629 796 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 SRGAP2BP0DMP2 458 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 MTHFRP42898 656 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 RABL6Q3YEC7 729 aaPredicted RBP7.9□□□□□ -1.14
CHD6-209ENST00000482596 CES5AQ6NT32 575 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 ATF7IPQ6VMQ6 1270 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 ZNF843Q8N446 348 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 FAM160A2Q8N612 972 aaPredicted RBP7.9□□□□□ -1.14
CHD6-209ENST00000482596 C12orf76Q8N812 135 aaPredicted RBP7.9□□□□□ -1.14
CHD6-209ENST00000482596 GPR152Q8TDT2 470 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 COPS5Q92905 334 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 C9orf78Q9NZ63 289 aaPredicted RBP7.9□□□□□ -1.14
CHD6-209ENST00000482596 RAI14Q9P0K7 980 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 DBR1Q9UK59 544 aaKnown RBP7.9□□□□□ -1.14
CHD6-209ENST00000482596 KLK13Q9UKR3 277 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 USTQ9Y2C2 406 aa7.9□□□□□ -1.14
CHD6-209ENST00000482596 NOTCH2Q04721 2471 aa7.9□□□□□ -1.15
CHD6-209ENST00000482596 SDK1Q7Z5N4 2213 aa7.9□□□□□ -1.15
CHD6-209ENST00000482596 ACACAQ13085 2346 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 PDS5AQ29RF7 1337 aaKnown RBP7.89□□□□□ -1.15
CHD6-209ENST00000482596 ASB14A6NK59 587 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 RSPH10B2B2RC85 870 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 EYA2O00167 538 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 HYAL3O43820 417 aaPredicted RBP7.89□□□□□ -1.15
CHD6-209ENST00000482596 NBPF7P0C2Y1 421 aaPredicted RBP7.89□□□□□ -1.15
CHD6-209ENST00000482596 RSPH10BP0C881 870 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 APOBRQ0VD83 1088 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 PTK7Q13308 1070 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 NAALADL2Q58DX5 795 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 RARS2Q5T160 578 aaKnown RBP7.89□□□□□ -1.15
CHD6-209ENST00000482596 SESTD1Q86VW0 696 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 PARP9Q8IXQ6 854 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 SEPT8Q92599 483 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 WDR11Q9BZH6 1224 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 RAVER2Q9HCJ3 691 aaKnown RBP7.89□□□□□ -1.15
CHD6-209ENST00000482596 ARHGEF3Q9NR81 526 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 HOMER2Q9NSB8 354 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 HDAC6Q9UBN7 1215 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 GTF2IRD1Q9UHL9 959 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 TMX2Q9Y320 296 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 MTF2Q9Y483 593 aaPredicted RBP7.89□□□□□ -1.15
CHD6-209ENST00000482596 APC2O95996 2303 aa7.89□□□□□ -1.15
CHD6-209ENST00000482596 TTC3P53804 2025 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 C2orf16Q68DN1 1984 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 A6NJR5 290 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 DYNLL1P63167 89 aaKnown RBP7.88□□□□□ -1.15
CHD6-209ENST00000482596 ITIH3Q06033 890 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 CCDC27Q2M243 656 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 FAM83BQ5T0W9 1011 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 PLPP4Q5VZY2 271 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 XRRA1Q6P2D8 792 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 CCER1Q8TC90 406 aaPredicted RBP7.88□□□□□ -1.15
CHD6-209ENST00000482596 RASGRP4Q8TDF6 673 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 KAT2BQ92831 832 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 NOL10Q9BSC4 688 aaKnown RBP7.88□□□□□ -1.15
CHD6-209ENST00000482596 MYL10Q9BUA6 226 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 EHD4Q9H223 541 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 MSRB2Q9Y3D2 182 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 NEUROG3Q9Y4Z2 214 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 DOPEY2Q9Y3R5 2298 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 DOCK8Q8NF50 2099 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 CREBBPQ92793 2442 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 MYH8P13535 1937 aa7.88□□□□□ -1.15
CHD6-209ENST00000482596 FSD2A1L4K1 749 aa7.87□□□□□ -1.15
CHD6-209ENST00000482596 HIDE1A8MVS5 230 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms