RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 KRT25Q7Z3Z0 450 aa22.74■■□□□ 1.23
CLIP2-205ENST00000482424 RPAINQ86UA6 219 aa22.74■■□□□ 1.23
CLIP2-205ENST00000482424 MBOAT7Q96N66 472 aa22.74■■□□□ 1.23
CLIP2-205ENST00000482424 MBLAC1A4D2B0 266 aaPredicted RBP22.73■■□□□ 1.23
CLIP2-205ENST00000482424 GRXCR1A8MXD5 290 aa22.73■■□□□ 1.23
CLIP2-205ENST00000482424 DDX39AO00148 427 aaKnown RBP22.73■■□□□ 1.23
CLIP2-205ENST00000482424 MSH4O15457 936 aa22.73■■□□□ 1.23
CLIP2-205ENST00000482424 THPOP40225 353 aa22.73■■□□□ 1.23
CLIP2-205ENST00000482424 PPFIA1Q13136 1202 aa22.73■■□□□ 1.23
CLIP2-205ENST00000482424 NONOQ15233 471 aaKnown RBP eCLIP22.73■■□□□ 1.23
CLIP2-205ENST00000482424 MARCH8Q5T0T0 291 aa22.73■■□□□ 1.23
CLIP2-205ENST00000482424 ZNF697Q5TEC3 545 aa22.73■■□□□ 1.23
CLIP2-205ENST00000482424 TNPO1Q92973 898 aaKnown RBP22.73■■□□□ 1.23
CLIP2-205ENST00000482424 FTOQ9C0B1 505 aaKnown RBP eCLIP22.73■■□□□ 1.23
CLIP2-205ENST00000482424 SLC4A7Q9Y6M7 1214 aa22.73■■□□□ 1.23
CLIP2-205ENST00000482424 RRN3P2A6NIE6 340 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 RSPH10B2B2RC85 870 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 BAIAP3O94812 1187 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 RSPH10BP0C881 870 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 DNAJB2P25686 324 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 KRT76Q01546 638 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 PLCB4Q15147 1175 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 GRIK4Q16099 956 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 SMAP1Q8IYB5 467 aaPredicted RBP22.72■■□□□ 1.23
CLIP2-205ENST00000482424 UIMC1Q96RL1 719 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 RIT2Q99578 217 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 PBX4Q9BYU1 374 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 TTYH1Q9H313 450 aaPredicted RBP22.72■■□□□ 1.23
CLIP2-205ENST00000482424 SEMA6BQ9H3T3 888 aa22.72■■□□□ 1.23
CLIP2-205ENST00000482424 JAK2O60674 1132 aa22.71■■□□□ 1.23
CLIP2-205ENST00000482424 INSRRP14616 1297 aa22.71■■□□□ 1.23
CLIP2-205ENST00000482424 FAM26DQ5JW98 314 aa22.71■■□□□ 1.23
CLIP2-205ENST00000482424 MIS18BP1Q6P0N0 1132 aa22.71■■□□□ 1.23
CLIP2-205ENST00000482424 TAF2Q6P1X5 1199 aa22.71■■□□□ 1.23
CLIP2-205ENST00000482424 CNKSR3Q6P9H4 555 aa22.71■■□□□ 1.23
CLIP2-205ENST00000482424 CCDC60Q8IWA6 550 aaPredicted RBP22.71■■□□□ 1.23
CLIP2-205ENST00000482424 OXER1Q8TDS5 423 aa22.71■■□□□ 1.23
CLIP2-205ENST00000482424 SLC5A5Q92911 643 aa22.71■■□□□ 1.23
CLIP2-205ENST00000482424 ZBBXA8MT70 800 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 TDP2O95551 362 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 PBX2P40425 430 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 INF2Q27J81 1249 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 FAM160B1Q5W0V3 765 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 SWSAP1Q6NVH7 229 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 PHOSPHO2Q8TCD6 241 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 ZSCAN31Q96LW9 406 aaPredicted RBP22.7■■□□□ 1.22
CLIP2-205ENST00000482424 ZNF302Q9NR11 478 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 TUBE1Q9UJT0 475 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 PCDHA10Q9Y5I2 948 aa22.7■■□□□ 1.22
CLIP2-205ENST00000482424 MAFBQ9Y5Q3 323 aaPredicted RBP22.7■■□□□ 1.22
CLIP2-205ENST00000482424 CCDC194A0A1B0GVG4 234 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 POTEB3A0JP26 581 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 ATP2A2P16615 1042 aaKnown RBP22.69■■□□□ 1.22
CLIP2-205ENST00000482424 ATP4AP20648 1035 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 RAB30Q15771 203 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 TCTN1Q2MV58 587 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 POTEBQ6S5H4 581 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 RUFY4Q6ZNE9 571 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 IL27Q8NEV9 243 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 TNFRSF25Q93038 417 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 TIFAQ96CG3 184 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 GUCD1Q96NT3 240 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 LLPHQ9BRT6 129 aaKnown RBP22.69■■□□□ 1.22
CLIP2-205ENST00000482424 TRPC6Q9Y210 931 aa22.69■■□□□ 1.22
CLIP2-205ENST00000482424 GBF1Q92538 1859 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 BACH1O14867 736 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 HBP1O60381 514 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 PSMD10O75832 226 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 PPP4R3AQ6IN85 833 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 PDXDC2PQ6P474 469 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 B3GNT9Q6UX72 402 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 ETNPPLQ8TBG4 499 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 ATP8B4Q8TF62 1192 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 FAM161BQ96MY7 647 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 SLC9A7Q96T83 725 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 SH2B1Q9NRF2 756 aaPredicted RBP22.68■■□□□ 1.22
CLIP2-205ENST00000482424 TCEAL9Q9UHQ7 104 aa22.68■■□□□ 1.22
CLIP2-205ENST00000482424 MYH9P35579 1960 aaKnown RBP22.67■■□□□ 1.22
CLIP2-205ENST00000482424 WDR81Q562E7 1941 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 ABHD14A-ACY1A0A1B0GW23 586 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 WDR64B1ANS9 1081 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 RPLP2P05387 115 aaKnown RBP22.67■■□□□ 1.22
CLIP2-205ENST00000482424 PSAPP07602 524 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 KRT2P35908 639 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 IGBP1P78318 339 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 MGAT3Q09327 533 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 RABEP1Q15276 862 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 PLEKHG4Q58EX7 1191 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 EARS2Q5JPH6 523 aaKnown RBP22.67■■□□□ 1.22
CLIP2-205ENST00000482424 LRCH2Q5VUJ6 765 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 NEK8Q86SG6 692 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 CCDC83Q8IWF9 413 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 TEKT3Q9BXF9 490 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 DDX25Q9UHL0 483 aaKnown RBP22.67■■□□□ 1.22
CLIP2-205ENST00000482424 MSRAQ9UJ68 235 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 STXBP5LQ9Y2K9 1186 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 PCDHA2Q9Y5H9 948 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 PCDHA11Q9Y5I1 949 aa22.67■■□□□ 1.22
CLIP2-205ENST00000482424 CDH23Q9H251 3354 aa22.66■■□□□ 1.22
CLIP2-205ENST00000482424 GAS7O60861 476 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms