RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 NOD1Q9Y239 953 aa10.47□□□□□ -0.73
HLA-B-253ENST00000481849 MRPL11Q9Y3B7 192 aaKnown RBP10.47□□□□□ -0.73
HLA-B-253ENST00000481849 SUPT16HQ9Y5B9 1047 aaKnown RBP10.47□□□□□ -0.73
HLA-B-253ENST00000481849 SLC4A7Q9Y6M7 1214 aa10.47□□□□□ -0.73
HLA-B-253ENST00000481849 REV3LO60673 3130 aa10.47□□□□□ -0.73
HLA-B-253ENST00000481849 A6NJR5 290 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 GH1P01241 217 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 MMP3P08254 477 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 TIMP2P16035 220 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 STXBP2Q15833 593 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 QPCTQ16769 361 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 TTC22Q5TAA0 569 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 HOMER1Q86YM7 354 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 MCF2L2Q86YR7 1114 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 RETREG2Q8NC44 543 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 IRF7Q92985 503 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 VWCEQ96DN2 955 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 FTOQ9C0B1 505 aaKnown RBP eCLIP10.46□□□□□ -0.73
HLA-B-253ENST00000481849 CNNM2Q9H8M5 875 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 THEGQ9P2T0 379 aa10.46□□□□□ -0.73
HLA-B-253ENST00000481849 MAP1BP46821 2468 aaKnown RBP10.46□□□□□ -0.74
HLA-B-253ENST00000481849 MCM3APO60318 1980 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 KLRF2D3W0D1 207 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 KPNA6O60684 536 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 PPP1R11O60927 126 aaPredicted RBP10.45□□□□□ -0.74
HLA-B-253ENST00000481849 LILRB3O75022 631 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 MYCLP12524 364 aaPredicted RBP10.45□□□□□ -0.74
HLA-B-253ENST00000481849 ATP2A2P16615 1042 aaKnown RBP10.45□□□□□ -0.74
HLA-B-253ENST00000481849 HOXA13P31271 388 aaPredicted RBP10.45□□□□□ -0.74
HLA-B-253ENST00000481849 PTH1RQ03431 593 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 ARHGAP1Q07960 439 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 TRDNQ13061 729 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 ADGRE1Q14246 886 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 PTGISQ16647 500 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 TUSC1Q2TAM9 212 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 PPP2R2DQ66LE6 453 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 NFRKBQ6P4R8 1299 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 CCDC62Q6P9F0 684 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 NPAS3Q8IXF0 933 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 MICALL1Q8N3F8 863 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 ALG1Q9BT22 464 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 AMNQ9BXJ7 453 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 CERS4Q9HA82 394 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 MRVI1Q9Y6F6 885 aa10.45□□□□□ -0.74
HLA-B-253ENST00000481849 OPLAHO14841 1288 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 IFIT3O14879 490 aaKnown RBP10.44□□□□□ -0.74
HLA-B-253ENST00000481849 NR3C2P08235 984 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 IQCF3P0C7M6 154 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 NT5C2P49902 561 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 MRPS5P82675 430 aaKnown RBP10.44□□□□□ -0.74
HLA-B-253ENST00000481849 NR5A1Q13285 461 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 BFSP2Q13515 415 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 SEC23AQ15436 765 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 GDF6Q6KF10 455 aaPredicted RBP10.44□□□□□ -0.74
HLA-B-253ENST00000481849 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 PIBF1Q8WXW3 757 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 KAT2BQ92831 832 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 FBXL18Q96ME1 805 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 PIGSQ96S52 555 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 IWS1Q96ST2 819 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 PXMP2Q9NR77 195 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 MAD2L2Q9UI95 211 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 PCDHA1Q9Y5I3 950 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 TAF6LQ9Y6J9 622 aa10.44□□□□□ -0.74
HLA-B-253ENST00000481849 LCTP09848 1927 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 RIF1Q5UIP0 2472 aaKnown RBP10.43□□□□□ -0.74
HLA-B-253ENST00000481849 ERICH2A1L162 156 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 RFXAPO00287 272 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 ZBTB5O15062 677 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 EIF3JO75822 258 aaKnown RBP10.43□□□□□ -0.74
HLA-B-253ENST00000481849 ZIC2O95409 532 aaPredicted RBP10.43□□□□□ -0.74
HLA-B-253ENST00000481849 CA3P07451 260 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 PFKMP08237 780 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 CYP21A2P08686 494 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 ZNF286BP0CG31 522 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 ACTN1P12814 892 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 CASTP20810 708 aaKnown RBP10.43□□□□□ -0.74
HLA-B-253ENST00000481849 CHMLP26374 656 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 PTPN11Q06124 597 aaPredicted RBP10.43□□□□□ -0.74
HLA-B-253ENST00000481849 DGKDQ16760 1214 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 SLC35G1Q2M3R5 365 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 RALYLQ86SE5 291 aaKnown RBP10.43□□□□□ -0.74
HLA-B-253ENST00000481849 FCHSD1Q86WN1 690 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
HLA-B-253ENST00000481849 C7orf31Q8N865 590 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 DDX41Q9UJV9 622 aaKnown RBP10.43□□□□□ -0.74
HLA-B-253ENST00000481849 PCDHA11Q9Y5I1 949 aa10.43□□□□□ -0.74
HLA-B-253ENST00000481849 USP24Q9UPU5 2620 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 PALM3A6NDB9 673 aaPredicted RBP10.42□□□□□ -0.74
HLA-B-253ENST00000481849 E7EWF7 191 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 RFC2P35250 354 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 HSD17B4P51659 736 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 GRM4Q14833 912 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 WTAPQ15007 396 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 TMEM67Q5HYA8 995 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 TMCO2Q7Z6W1 182 aaPredicted RBP10.42□□□□□ -0.74
HLA-B-253ENST00000481849 CCDC155Q8N6L0 562 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 IL31RAQ8NI17 732 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 RUFY2Q8WXA3 655 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms