RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SYT10Q6XYQ8 523 aa21.08■□□□□ 0.96
CCM2-214ENST00000481194 NLRP7Q8WX94 980 aa21.08■□□□□ 0.96
CCM2-214ENST00000481194 NLRC4Q9NPP4 1024 aa21.08■□□□□ 0.96
CCM2-214ENST00000481194 KCNQ5Q9NR82 932 aa21.08■□□□□ 0.96
CCM2-214ENST00000481194 ROBO3Q96MS0 1386 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 SCP2P22307 547 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 PDE6CP51160 858 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 GUF1Q8N442 669 aaKnown RBP21.07■□□□□ 0.96
CCM2-214ENST00000481194 GPBP1L1Q9HC44 474 aaPredicted RBP21.07■□□□□ 0.96
CCM2-214ENST00000481194 TCP11X2Q5H9J9 407 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 PIGOQ8TEQ8 1089 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 HUNKP57058 714 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 TNFAIP2Q03169 654 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 ARHGAP44Q17R89 818 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 GSTTP1A0A1W2PQM5 241 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 ECE1P42892 770 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 PHKA2P46019 1235 aa21.07■□□□□ 0.96
CCM2-214ENST00000481194 HLTFQ14527 1009 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCM2-214ENST00000481194 IFIH1Q9BYX4 1025 aaKnown RBP21.07■□□□□ 0.96
CCM2-214ENST00000481194 K7ERI5 159 aa21.06■□□□□ 0.96
CCM2-214ENST00000481194 TYW1BQ6NUM6 668 aa21.06■□□□□ 0.96
CCM2-214ENST00000481194 SFR1Q86XK3 245 aa21.06■□□□□ 0.96
CCM2-214ENST00000481194 SPATA33Q96N06 139 aa21.06■□□□□ 0.96
CCM2-214ENST00000481194 C7orf25Q9BPX7 421 aa21.06■□□□□ 0.96
CCM2-214ENST00000481194 GBA2Q9HCG7 927 aaPredicted RBP21.06■□□□□ 0.96
CCM2-214ENST00000481194 DLATP10515 647 aaKnown RBP21.06■□□□□ 0.96
CCM2-214ENST00000481194 POLR2FP61218 127 aaKnown RBP21.06■□□□□ 0.96
CCM2-214ENST00000481194 INTS8Q75QN2 995 aaKnown RBP21.06■□□□□ 0.96
CCM2-214ENST00000481194 MROH8Q9H579 483 aa21.06■□□□□ 0.96
CCM2-214ENST00000481194 DYNC1I1O14576 645 aa21.06■□□□□ 0.96
CCM2-214ENST00000481194 TLR3O15455 904 aaKnown RBP21.06■□□□□ 0.96
CCM2-214ENST00000481194 VCAM1P19320 739 aa21.06■□□□□ 0.96
CCM2-214ENST00000481194 SWSAP1Q6NVH7 229 aa21.06■□□□□ 0.96
CCM2-214ENST00000481194 ZNF771Q7L3S4 317 aaPredicted RBP21.06■□□□□ 0.96
CCM2-214ENST00000481194 IPO4Q8TEX9 1081 aaKnown RBP21.06■□□□□ 0.96
CCM2-214ENST00000481194 TYW1Q9NV66 732 aaKnown RBP21.06■□□□□ 0.96
CCM2-214ENST00000481194 POTEFA5A3E0 1075 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 POTEIP0CG38 1075 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 POTEGQ6S5H5 508 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 POTEEQ6S8J3 1075 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 SPOPO43791 374 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 MYL3P08590 195 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 LRRC8AQ8IWT6 810 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 SREBF1P36956 1147 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 ADKP55263 362 aaKnown RBP21.05■□□□□ 0.96
CCM2-214ENST00000481194 PEX3P56589 373 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 CCDC50Q8IVM0 306 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 CCDC127Q96BQ5 260 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 ARHGEF37A1IGU5 675 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 TNPO2O14787 897 aaKnown RBP21.05■□□□□ 0.96
CCM2-214ENST00000481194 MYZAPP0CAP1 466 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 CD19P15391 556 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 CDC42EP1Q00587 391 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 CCDC102AQ96A19 550 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 AGBL1Q96MI9 1066 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 CTTNBP2NLQ9P2B4 639 aa21.05■□□□□ 0.96
CCM2-214ENST00000481194 FAM205CA6NFA0 338 aa21.04■□□□□ 0.96
CCM2-214ENST00000481194 CA8P35219 290 aa21.04■□□□□ 0.96
CCM2-214ENST00000481194 VSTM4Q8IW00 320 aa21.04■□□□□ 0.96
CCM2-214ENST00000481194 PSPC1Q8WXF1 523 aaKnown RBP21.04■□□□□ 0.96
CCM2-214ENST00000481194 WTIPA6NIX2 430 aaPredicted RBP21.04■□□□□ 0.96
CCM2-214ENST00000481194 XKR3Q5GH77 459 aa21.04■□□□□ 0.96
CCM2-214ENST00000481194 MTMR14Q8NCE2 650 aa21.04■□□□□ 0.96
CCM2-214ENST00000481194 RPS6KC1Q96S38 1066 aa21.04■□□□□ 0.96
CCM2-214ENST00000481194 KIAA0391O15091 583 aaKnown RBP21.04■□□□□ 0.96
CCM2-214ENST00000481194 GRIK5Q16478 980 aa21.04■□□□□ 0.96
CCM2-214ENST00000481194 TAF12Q16514 161 aa21.04■□□□□ 0.96
CCM2-214ENST00000481194 POLR3CQ9BUI4 534 aaPredicted RBP21.04■□□□□ 0.96
CCM2-214ENST00000481194 UBE4BO95155 1302 aa21.04■□□□□ 0.96
CCM2-214ENST00000481194 ZC3H15Q8WU90 426 aaKnown RBP21.04■□□□□ 0.96
CCM2-214ENST00000481194 PPATQ06203 517 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 ERCC3P19447 782 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 KYAT1Q16773 422 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 IFFO1Q0D2I5 559 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 KNOP1Q1ED39 458 aaKnown RBP21.03■□□□□ 0.96
CCM2-214ENST00000481194 ZNF233A6NK53 670 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 GH1P01241 217 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 LRMPQ12912 555 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 PKN1Q16512 942 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 Q4G0T1 1027 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 GDAQ9Y2T3 454 aa21.03■□□□□ 0.96
CCM2-214ENST00000481194 ZSCAN20P17040 1043 aaPredicted RBP21.02■□□□□ 0.96
CCM2-214ENST00000481194 HAUS4Q9H6D7 363 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 YWHABP31946 246 aaKnown RBP21.02■□□□□ 0.96
CCM2-214ENST00000481194 INPP5BP32019 993 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 NBPF11Q86T75 865 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 TRIM11Q96F44 468 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 NDST4Q9H3R1 872 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 SAMSN1Q9NSI8 373 aaKnown RBP21.02■□□□□ 0.96
CCM2-214ENST00000481194 DSG3P32926 999 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 TRIM58Q8NG06 486 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.02■□□□□ 0.96
CCM2-214ENST00000481194 CLIC2O15247 247 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 PRR29P0C7W0 189 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 TXNP10599 105 aaKnown RBP21.02■□□□□ 0.96
CCM2-214ENST00000481194 FAM193AP78312 1265 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 MSTO1Q9BUK6 570 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 C4BP0C0L5 1744 aa21.02■□□□□ 0.96
CCM2-214ENST00000481194 PP2D1A8MPX8 630 aa21.02■□□□□ 0.95
CCM2-214ENST00000481194 MARK3P27448 753 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms